RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 CDAP32320 146 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 MPV17P39210 176 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 AQP2P41181 271 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 GZMMP51124 257 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 PCBD1P61457 104 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 PSG4Q00888 419 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 AWAT1Q58HT5 328 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 THEM4Q5T1C6 240 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 METTL21CQ5VZV1 264 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 SLC25A47Q6Q0C1 308 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ZER1Q7Z7L7 766 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 NKAIN4Q8IVV8 208 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ZDHHC22Q8N966 263 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 PFN4Q8NHR9 129 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ST7LQ8TDW4 575 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 DVL3Q92997 716 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-218ENST00000548945 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ALG12Q9BV10 488 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 OR2J1Q9GZK6 312 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ELOVL3Q9HB03 270 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ESM1Q9NQ30 184 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 C20orf141Q9NUB4 165 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 POLR3KQ9Y2Y1 108 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-218ENST00000548945 TUBG1P23258 451 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 TAS2R41P59536 307 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 PPP1CBP62140 327 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 UBA52P62987 128 aaKnown RBP10.88□□□□□ -0.67
PTCH1-218ENST00000548945 CD47Q08722 323 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 FOXL1Q12952 345 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 SGCAQ16586 387 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 TMEM255AQ5JRV8 349 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 SPATA46Q5T0L3 261 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 ARL9Q6T311 187 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 FOXL2NBQ6ZUU3 175 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 SYT9Q86SS6 491 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 AKR7LQ8NHP1 331 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 MOSPD2Q8NHP6 518 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 SLC25A40Q8TBP6 338 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 HDAC2Q92769 488 aaKnown RBP10.88□□□□□ -0.67
PTCH1-218ENST00000548945 POP5Q969H6 163 aaKnown RBP10.88□□□□□ -0.67
PTCH1-218ENST00000548945 RBP7Q96R05 134 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 WACQ9BTA9 647 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 ZNF747Q9BV97 191 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 OR2H1Q9GZK4 316 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 WNT5BQ9H1J7 359 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
PTCH1-218ENST00000548945 TUBG2Q9NRH3 451 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
PTCH1-218ENST00000548945 MRGBPQ9NV56 204 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 HIF3AQ9Y2N7 669 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 SH3GLB1Q9Y371 365 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 MED31Q9Y3C7 131 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 TIMM10BQ9Y5J6 103 aa10.88□□□□□ -0.67
PTCH1-218ENST00000548945 IGKV1D-43A0A0B4J1Z2 117 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 ISPDA4D126 451 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 IFNA14P01570 189 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 IGHMP01871 453 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 HKR1P10072 659 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 GUCA1AP43080 201 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-218ENST00000548945 ARHGDIAP52565 204 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 RPL27P61353 136 aaKnown RBP10.87□□□□□ -0.67
PTCH1-218ENST00000548945 ERVK-25P63136 954 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 LCN2P80188 198 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 FMODQ06828 376 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 CYLC2Q14093 348 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-218ENST00000548945 ALG10Q5BKT4 473 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 PRR31Q5SQ13 230 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 NANOGP8Q6NSW7 305 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 RBMS3Q6XE24 437 aaKnown RBP10.87□□□□□ -0.67
PTCH1-218ENST00000548945 CCDC121Q6ZUS5 278 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 RFPL4BQ6ZWI9 263 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 CALHM3Q86XJ0 350 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 SPICQ8N5J4 248 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 FITM2Q8N6M3 262 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 OR8J3Q8NGG0 315 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 ABHD4Q8TB40 342 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 NSMAFQ92636 917 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 MYLK2Q9H1R3 596 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 NPTNQ9Y639 398 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 VWFP04275 2813 aa10.87□□□□□ -0.67
PTCH1-218ENST00000548945 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 A6NIZ1 184 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 NPPAP01160 153 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 COX5BP10606 129 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 ZFP36P26651 326 aaKnown RBP10.86□□□□□ -0.67
PTCH1-218ENST00000548945 LAP3P28838 519 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 RAP1BP61224 184 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 RAP1AP62834 184 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 CDK5R2Q13319 367 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 PIN1Q13526 163 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-218ENST00000548945 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 ANKDD1AQ495B1 522 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 TMEM155Q4W5P6 130 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 MTX3Q5HYI7 312 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 COQ5Q5HYK3 327 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms