RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TAF15Q92804 592 aaKnown RBP eCLIP13.96□□□□□ -0.17
SSH1-208ENST00000548522 MCHR2Q969V1 340 aa13.96□□□□□ -0.17
SSH1-208ENST00000548522 NR1H4Q96RI1 486 aaPredicted RBP13.96□□□□□ -0.17
SSH1-208ENST00000548522 ECSITQ9BQ95 431 aa13.96□□□□□ -0.17
SSH1-208ENST00000548522 CPPED1Q9BRF8 314 aaPredicted RBP13.96□□□□□ -0.17
SSH1-208ENST00000548522 DECR2Q9NUI1 292 aa13.96□□□□□ -0.17
SSH1-208ENST00000548522 UBAP1Q9NZ09 502 aa13.96□□□□□ -0.17
SSH1-208ENST00000548522 GPR160Q9UJ42 338 aa13.96□□□□□ -0.17
SSH1-208ENST00000548522 RIMS3Q9UJD0 308 aa13.96□□□□□ -0.17
SSH1-208ENST00000548522 ARHGAP32A7KAX9 2087 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 ISPDA4D126 451 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 IGHV3-13P01766 116 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 CCNOP22674 350 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 ZFP36P26651 326 aaKnown RBP13.95□□□□□ -0.18
SSH1-208ENST00000548522 ZNF81P51508 661 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 PCBP3P57721 371 aaKnown RBP13.95□□□□□ -0.18
SSH1-208ENST00000548522 HFEQ30201 348 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 DLEU7Q6UYE1 221 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 SYT14Q8NB59 555 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 NOXO1Q8NFA2 376 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 VANGL1Q8TAA9 524 aaPredicted RBP13.95□□□□□ -0.18
SSH1-208ENST00000548522 GEMIN6Q8WXD5 167 aaKnown RBP13.95□□□□□ -0.18
SSH1-208ENST00000548522 LRGUKQ96M69 825 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 C1orf147Q96MC9 270 aaPredicted RBP13.95□□□□□ -0.18
SSH1-208ENST00000548522 ZNF607Q96SK3 696 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 BCL2L14Q9BZR8 327 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 C1orf198Q9H425 327 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 NANSQ9NR45 359 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 CMTM6Q9NX76 183 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.95□□□□□ -0.18
SSH1-208ENST00000548522 SNX13Q9Y5W8 968 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 GMEB1Q9Y692 573 aa13.95□□□□□ -0.18
SSH1-208ENST00000548522 FMO6PO60774 539 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 SERPINB7O75635 380 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 SLC2A10O95528 541 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 IGHG1P01857 330 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 ASAH2BP0C7U1 165 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 FCGR1AP12314 374 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 GPX2P18283 190 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 CDAP32320 146 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 MMP15P51511 669 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 CLRN1P58418 232 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 TEKQ02763 1124 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 SELPLGQ14242 412 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 HIST3H3Q16695 136 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 PABPC1L2AQ5JQF8 200 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 THEM4Q5T1C6 240 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 RFPL4BQ6ZWI9 263 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 FKBP9P1Q75LS8 142 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 SPATA24Q86W54 205 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 DEFB108BQ8NET1 73 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 ADAMTS16Q8TE57 1224 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 RAB1CQ92928 201 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 ELMOD3Q96FG2 381 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 TIMD4Q96H15 378 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 CGREF1Q99674 301 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 VCXQ9H320 206 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 MMP26Q9NRE1 261 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 DDX28Q9NUL7 540 aaKnown RBP13.94□□□□□ -0.18
SSH1-208ENST00000548522 MAGEL2Q9UJ55 1249 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 ZNF229Q9UJW7 825 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 SLC7A7Q9UM01 511 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 ANGPT4Q9Y264 503 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 UGT2A1Q9Y4X1 527 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 AP4S1Q9Y587 144 aa13.94□□□□□ -0.18
SSH1-208ENST00000548522 LOC100509620A0A075B734 347 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 IGKV1D-43A0A0B4J1Z2 117 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 IQCMA0A1B0GVH7 501 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 DNAJC9-AS1A6NH13 148 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 F13BP05160 661 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 HKR1P10072 659 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 PPIBP23284 216 aaKnown RBP13.93□□□□□ -0.18
SSH1-208ENST00000548522 APLNRP35414 380 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 GSK3BP49841 420 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 HSF2Q03933 536 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 PLP2Q04941 152 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 FMODQ06828 376 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 TUSC1Q2TAM9 212 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 NANOGP8Q6NSW7 305 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 IZUMO2Q6UXV1 221 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 BCL6BQ8N143 479 aaPredicted RBP13.93□□□□□ -0.18
SSH1-208ENST00000548522 PAPD5Q8NDF8 572 aaKnown RBP13.93□□□□□ -0.18
SSH1-208ENST00000548522 AKR7LQ8NHP1 331 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 ASB10Q8WXI3 467 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 NABP1Q96AH0 204 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 MARS2Q96GW9 593 aaKnown RBP13.93□□□□□ -0.18
SSH1-208ENST00000548522 SEPHS2Q99611 448 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 ZNF426Q9BUY5 554 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 MRPL13Q9BYD1 178 aaKnown RBP13.93□□□□□ -0.18
SSH1-208ENST00000548522 NANOGQ9H9S0 305 aa13.93□□□□□ -0.18
SSH1-208ENST00000548522 MEPEQ9NQ76 525 aaPredicted RBP13.93□□□□□ -0.18
SSH1-208ENST00000548522 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
SSH1-208ENST00000548522 M0QX08 132 aa13.92□□□□□ -0.18
SSH1-208ENST00000548522 MT-ND5P03915 603 aa13.92□□□□□ -0.18
SSH1-208ENST00000548522 ZNF32P17041 273 aa13.92□□□□□ -0.18
SSH1-208ENST00000548522 CD247P20963 164 aa13.92□□□□□ -0.18
SSH1-208ENST00000548522 STOMP27105 288 aa13.92□□□□□ -0.18
SSH1-208ENST00000548522 GTF2A1P52655 376 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms