RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 DVL2O14641 736 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 MSTNO14793 375 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 LIMS3P0CW19 117 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 LIMS4P0CW20 117 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 OR8G3PP0DMU2 310 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 IGHV1-2P23083 117 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 TUBA4AP68366 448 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 TGFBR3Q03167 851 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 IGFBP7Q16270 282 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 SLC18B1Q6NT16 456 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 KLHL24Q6TFL4 600 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 LHFPL3Q86UP9 236 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 LRRC18Q8N456 261 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 CLEC2DQ9UHP7 191 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 ERGIC3Q9Y282 383 aa25.26■■□□□ 1.63
BRF1-213ENST00000548421 PHYHO14832 338 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 FARS2O95363 451 aaKnown RBP25.25■■□□□ 1.63
BRF1-213ENST00000548421 ALOX5APP20292 161 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 COX5AP20674 150 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 ZNF85Q03923 595 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 ENDOGQ14249 297 aaKnown RBP25.25■■□□□ 1.63
BRF1-213ENST00000548421 GALEQ14376 348 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 FJX1Q86VR8 437 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 LINC00346Q8IVM7 164 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 RFLNBQ8N5W9 214 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 OR1K1Q8NGR3 316 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 ZNF649Q9BS31 505 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 ALG8Q9BVK2 526 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 ASH2LQ9UBL3 628 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 SCOCQ9UIL1 159 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 KLHDC2Q9Y2U9 406 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 LHFPL6Q9Y693 200 aa25.25■■□□□ 1.63
BRF1-213ENST00000548421 A0A1B0GUH1 482 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 MYL12BO14950 172 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 CST2P09228 141 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 GNLYP22749 145 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 EIF2B1Q14232 305 aaKnown RBP25.24■■□□□ 1.63
BRF1-213ENST00000548421 TBCEQ15813 527 aaPredicted RBP25.24■■□□□ 1.63
BRF1-213ENST00000548421 ANKRD16Q6P6B7 361 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 THEM6Q8WUY1 208 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 SH3GL3Q99963 347 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 PCNX1Q96RV3 2341 aa25.24■■□□□ 1.63
BRF1-213ENST00000548421 TMEM129A0AVI4 362 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 C1QL1O75973 258 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 MAP2K4P45985 399 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 EMX1Q04741 257 aaPredicted RBP25.23■■□□□ 1.63
BRF1-213ENST00000548421 AQP6Q13520 282 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 P2RY6Q15077 328 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 SOWAHCQ53LP3 525 aaPredicted RBP25.23■■□□□ 1.63
BRF1-213ENST00000548421 SSX6Q7RTT6 188 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 MRGPRGQ86SM5 289 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 OR2AJ1Q8NGZ0 328 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 PRR7Q8TB68 274 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 ASB17Q8WXJ9 295 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 MRPL48Q96GC5 212 aaKnown RBP25.23■■□□□ 1.63
BRF1-213ENST00000548421 MYCBPQ99417 103 aaPredicted RBP25.23■■□□□ 1.63
BRF1-213ENST00000548421 MND1Q9BWT6 205 aa25.23■■□□□ 1.63
BRF1-213ENST00000548421 EEF1E1-BLOC1S5C9J1V9 151 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 EEF1E1O43324 174 aaKnown RBP25.22■■□□□ 1.63
BRF1-213ENST00000548421 PCMT1P22061 227 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 UQCRFS1P47985 274 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 CORO6Q6QEF8 472 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 ZNF474Q6S9Z5 364 aaPredicted RBP25.22■■□□□ 1.63
BRF1-213ENST00000548421 ZNF322Q6U7Q0 402 aaPredicted RBP25.22■■□□□ 1.63
BRF1-213ENST00000548421 KCTD8Q6ZWB6 473 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 DCXRQ7Z4W1 244 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 LUZP2Q86TE4 346 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 KLHL36Q8N4N3 616 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 ZNF433Q8N7K0 673 aaPredicted RBP25.22■■□□□ 1.63
BRF1-213ENST00000548421 NANOGP1Q8N7R0 232 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 ABHD6Q9BV23 337 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 TTTY10Q9BZA0 68 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 KCNN2Q9H2S1 579 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 VCX3AQ9NNX9 186 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 ACOT13Q9NPJ3 140 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 GDF2Q9UK05 429 aaPredicted RBP25.22■■□□□ 1.63
BRF1-213ENST00000548421 CACNA1CQ13936 2221 aa25.22■■□□□ 1.63
BRF1-213ENST00000548421 A0A096LPE4 126 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 A0A1W2PPZ6 126 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 A8MXE2 369 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 LYZL6O75951 148 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 CLPTM1O96005 669 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 PTHP01270 115 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 ACTA2P62736 377 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 ACTG2P63267 376 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 TMEM154Q6P9G4 183 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 SLC16A14Q7RTX9 510 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 LIX1LQ8IVB5 337 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 SKA3Q8IX90 412 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 RELL2Q8NC24 303 aaPredicted RBP25.21■■□□□ 1.63
BRF1-213ENST00000548421 ST7LQ8TDW4 575 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 FBXO17Q96EF6 278 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 WACQ9BTA9 647 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 C1orf198Q9H425 327 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 CAB39Q9Y376 341 aaPredicted RBP25.21■■□□□ 1.63
BRF1-213ENST00000548421 EGR3Q06889 387 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 TMPRSS11AQ6ZMR5 421 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 SYT9Q86SS6 491 aa25.21■■□□□ 1.63
BRF1-213ENST00000548421 CXorf67Q86X51 503 aaPredicted RBP25.21■■□□□ 1.63
BRF1-213ENST00000548421 C1orf162Q8NEQ5 155 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms