RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	CSF3	P09919	207 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	DANCR	P0C864	163 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	POU2F1	P14859	743 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	RPA2	P15927	270 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	SLC25A16	P16260	332 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	IL1RN	P18510	177 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	PCMT1	P22061	227 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	GDF1	P27539	372 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	PTPN6	P29350	595 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	CD79B	P40259	229 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	ZNF140	P52738	457 aa	Predicted RBP	2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	LOXL1	Q08397	574 aa	Predicted RBP	2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	TFDP2	Q14188	446 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	CAPRIN1	Q14444	709 aa	Known RBP	2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	GRB7	Q14451	532 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	FAM174B	Q3ZCQ3	159 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	PRAMEF20	Q5VT98	475 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	OR2A2	Q6IF42	318 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	CLEC2A	Q6UVW9	174 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	ENPP6	Q6UWR7	440 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	B3GLCT	Q6Y288	498 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	HSDL2	Q6YN16	418 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	CHMP1B	Q7LBR1	199 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	TMPRSS11B	Q86T26	416 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	LUZP2	Q86TE4	346 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	KLHDC8A	Q8IYD2	350 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	PQLC3	Q8N755	202 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	BHLHE23	Q8NDY6	225 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	FAM71C	Q8NEG0	241 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	STEAP2	Q8NFT2	490 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	OR56B1	Q8NGI3	324 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	OR8K3	Q8NH51	312 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	ZNF671	Q8TAW3	534 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	SLC22A8	Q8TCC7	542 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	NAT14	Q8WUY8	206 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	CCDC107	Q8WV48	283 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	CKAP2	Q8WWK9	683 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	C16orf58	Q96GQ5	468 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	MUS81	Q96NY9	551 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	WFIKKN1	Q96NZ8	548 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	OLFM3	Q96PB7	478 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	RNF157	Q96PX1	679 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	GPA33	Q99795	319 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	SPAG8	Q99932	426 aa	Predicted RBP	2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	BCL7B	Q9BQE9	202 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	OVOL2	Q9BRP0	275 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	ATG101	Q9BSB4	218 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	PCBD2	Q9H0N5	130 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	UBQLN3	Q9H347	655 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	ADAP2	Q9NPF8	381 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	DEPP	Q9NTK1	212 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	KLHL28	Q9NXS3	571 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	SPRR3	Q9UBC9	169 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	GPR132	Q9UNW8	380 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	VSIG4	Q9Y279	399 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	MRPS33	Q9Y291	106 aa	Known RBP	2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	STK38L	Q9Y2H1	464 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	GRIP1	Q9Y3R0	1128 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	CHTOP	Q9Y3Y2	248 aa	Known RBP	2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	ATG4B	Q9Y4P1	393 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	WIPI2	Q9Y4P8	454 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	MMACHC	Q9Y4U1	282 aa		2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	ANK3	Q12955	4377 aa	Known RBP	2.69	□□□□□ -1.98
RPAP3-205	ENST00000548211	SERTM2	A0A1B0GWG4	89 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211		A0A1W2PP18	115 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	MFSD2B	A6NFX1	497 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	HACD1	B0YJ81	288 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211		G3V3Y1	287 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211		K7EQM0	130 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	PFDN6	O15212	129 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	CDH16	O75309	829 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	RDH16	O75452	317 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	TRAPPC6A	O75865	159 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	MFN2	O95140	757 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	C1orf105	O95561	183 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	CAT	P04040	527 aa	Known RBP	2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	OR2T7	P0C7T2	308 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	RNH1	P13489	461 aa	Known RBP	2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	ANXA8	P13928	327 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	RPL35A	P18077	110 aa	Known RBP	2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	DRD5	P21918	477 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	KDELR1	P24390	212 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	MSN	P26038	577 aa	Known RBP	2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	CTNNA2	P26232	953 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	PSMB5	P28074	263 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	UGT2B10	P36537	528 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	ACVR1B	P36896	505 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	SRP14	P37108	136 aa	Known RBP	2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	IER3	P46695	156 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	SLC9A3	P48764	834 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	DNASE1L1	P49184	302 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	TTPA	P49638	278 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	MTCP1	P56278	107 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	RPP38	P78345	283 aa	Known RBP	2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	RGS1	Q08116	209 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	LCP2	Q13094	533 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	MSLN	Q13421	630 aa	Predicted RBP	2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	DOC2A	Q14183	400 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	PDK4	Q16654	411 aa		2.68	□□□□□ -1.98
RPAP3-205	ENST00000548211	SLC35D3	Q5M8T2	416 aa		2.68	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms