RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 FAM182AQ5T1J6 154 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 SPECC1LQ69YQ0 1117 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 TIGD3Q6B0B8 471 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 REG3GQ6UW15 175 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 DNM1P46Q6ZS02 220 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 SLC35D2Q76EJ3 337 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 NDUFAF7Q7L592 441 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF571Q7Z3V5 609 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF546Q86UE3 836 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 SKA3Q8IX90 412 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 CADM2Q8N3J6 435 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 DDI1Q8WTU0 396 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 CACNG8Q8WXS5 425 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 SMARCD2Q92925 531 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 RNF170Q96K19 258 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ART5Q96L15 291 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 PGLYRP4Q96LB8 373 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 OR5B12Q96R08 314 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 CYTH2Q99418 400 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 PYGO2Q9BRQ0 406 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 NAT9Q9BTE0 207 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 CCDC28BQ9BUN5 200 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 HES7Q9BYE0 225 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 SRXN1Q9BYN0 137 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 NDEL1Q9GZM8 345 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 NEUROG2Q9H2A3 272 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 OR52A5Q9H2C5 316 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 GOLPH3Q9H4A6 298 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 TUBB1Q9H4B7 451 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 PARVGQ9HBI0 331 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 MIEF1Q9NQG6 463 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 AGPAT4Q9NRZ5 378 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 MCUBQ9NWR8 336 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 LGALS13Q9UHV8 139 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 UBQLN1Q9UMX0 589 aaKnown RBP3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ING4Q9UNL4 249 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 V9GYY5 206 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-210ENST00000547654 BTAF1O14981 1849 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 MTUS2Q5JR59 1369 aa3.34□□□□□ -1.88
SCAF11-210ENST00000547654 TECPR2O15040 1411 aa3.34□□□□□ -1.88
SCAF11-210ENST00000547654 CCDC141Q6ZP82 1450 aa3.34□□□□□ -1.88
SCAF11-210ENST00000547654 KCPQ6ZWJ8 1503 aa3.34□□□□□ -1.88
SCAF11-210ENST00000547654 USP54Q70EL1 1684 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 IFT172Q9UG01 1749 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 HTTP42858 3142 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 A0A1W2PRF3 423 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 A0A1W2PRM7 423 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 PRSS37A4D1T9 235 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 FAM231BA6NCW3 169 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 USP27XA6NNY8 438 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 LYRM9A8MSI8 78 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 IQCF5A8MTL0 148 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 RFXANKO14593 260 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ZBTB5O15062 677 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 PRPS2P11908 318 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF3P17036 446 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 CMA1P23946 247 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 KIR2DS2P43631 304 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 UGT2B15P54855 530 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 STXBP1P61764 594 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 RPS15AP62244 130 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 LRRC63Q05C16 580 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 C18orf21Q32NC0 220 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 TRMT5Q32P41 509 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 TPRG1LQ5T0D9 272 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ADNP2Q6IQ32 1131 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ASCL4Q6XD76 172 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 TRMT10CQ7L0Y3 403 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ERO1BQ86YB8 467 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 SPAG16Q8N0X2 631 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 PUSL1Q8N0Z8 303 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF557Q8N988 423 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 OR56A4Q8NGH8 313 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 OR2A12Q8NGT7 310 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 CCDC26Q8TAB7 109 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 NDRG1Q92597 394 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 NOL4LQ96MY1 436 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 FOXN4Q96NZ1 517 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 CATSPER2Q96P56 530 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 OR5M11Q96RB7 305 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 MCCC1Q96RQ3 725 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 LLPHQ9BRT6 129 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 PELOQ9BRX2 385 aaKnown RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 OSBPL10Q9BXB5 764 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 DEFB129Q9H1M3 183 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 RNF167Q9H6Y7 350 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 VCX3AQ9NNX9 186 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 TREM2Q9NZC2 230 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ARMCX1Q9P291 453 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF282Q9UDV7 671 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 DCDC2Q9UHG0 476 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 MUTYHQ9UIF7 546 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 KIF25Q9UIL4 384 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 V9GY05 133 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 FANCIQ9NVI1 1328 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 ANKRD30BQ9BXX2 1392 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 CENPFP49454 3210 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 HFM1A2PYH4 1435 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 TNS3Q68CZ2 1445 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 TRPM1Q7Z4N2 1603 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms