RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 RIDAP52758 137 aaKnown RBP9.89□□□□□ -0.83
CUX1-212ENST00000547394 GUCA2AQ02747 115 aa9.89□□□□□ -0.83
CUX1-212ENST00000547394 EGR3Q06889 387 aa9.89□□□□□ -0.83
CUX1-212ENST00000547394 PEAR1Q5VY43 1037 aaPredicted RBP9.89□□□□□ -0.83
CUX1-212ENST00000547394 PYHIN1Q6K0P9 492 aa9.89□□□□□ -0.83
CUX1-212ENST00000547394 CFAP77Q6ZQR2 320 aa9.89□□□□□ -0.83
CUX1-212ENST00000547394 RNF144BQ7Z419 303 aa9.89□□□□□ -0.83
CUX1-212ENST00000547394 RPS19BP1Q86WX3 136 aaKnown RBP9.89□□□□□ -0.83
CUX1-212ENST00000547394 OR52N5Q8NH56 324 aa9.89□□□□□ -0.83
CUX1-212ENST00000547394 SPACA5Q96QH8 159 aa9.89□□□□□ -0.83
CUX1-212ENST00000547394 NCOA6Q14686 2063 aaPredicted RBP9.88□□□□□ -0.83
CUX1-212ENST00000547394 DOCK7Q96N67 2140 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 TRBV5-5A0A0J9YX44 114 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 TMEM269A0A1B0GVZ9 245 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ORC5O43913 435 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ENPP1P22413 925 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 PRSS12P56730 875 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 CLRN1P58418 232 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ANGPT1Q15389 498 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 C3orf33Q6P1S2 294 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 KCTD20Q7Z5Y7 419 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 UEVLDQ8IX04 471 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 RNF170Q96K19 258 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 MRGPRX4Q96LA9 322 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ALKBH4Q9NXW9 302 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 FOXJ2Q9P0K8 574 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ABRACLQ9P1F3 81 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ELF5Q9UKW6 265 aaPredicted RBP9.88□□□□□ -0.83
CUX1-212ENST00000547394 OTOGLQ3ZCN5 2332 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 C5orf63A6NC05 138 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 TMEM212A6NML5 194 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 RER1O15258 196 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ZNHIT1O43257 154 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ZNF254O75437 659 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 UBL3O95164 117 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 RFPL3SP0C7P2 107 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ARSBP15848 533 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 ZNF24P17028 368 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 CRABP1P29762 137 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 STARP49675 285 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 DAP3P51398 398 aaKnown RBP9.88□□□□□ -0.83
CUX1-212ENST00000547394 MRPS15P82914 257 aaKnown RBP9.88□□□□□ -0.83
CUX1-212ENST00000547394 GALK2Q01415 458 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 UBE2NLQ5JXB2 153 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 TMEM69Q5SWH9 247 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 RAB11FIP2Q7L804 512 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 DND1Q8IYX4 353 aaKnown RBP9.88□□□□□ -0.83
CUX1-212ENST00000547394 ST7LQ8TDW4 575 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 RNF128Q8TEB7 428 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 CT55Q8WUE5 264 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 SLX1AQ9BQ83 275 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 SLITRK2Q9H156 845 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 WDR54Q9H977 334 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 HPF1Q9NWY4 346 aa9.88□□□□□ -0.83
CUX1-212ENST00000547394 A0A0A6YYJ9 748 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 SLC6A1P30531 599 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 DCTDP32321 178 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 SSR4P51571 173 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 P2RY4P51582 365 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 CLDN17P56750 224 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PLCZ1Q86YW0 608 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 OR10S1Q8NGN2 331 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 HAVCR2Q8TDQ0 301 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 NKD1Q969G9 470 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 ZNF385AQ96PM9 386 aaKnown RBP9.87□□□□□ -0.83
CUX1-212ENST00000547394 IER2Q9BTL4 223 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PAQR5Q9NXK6 330 aaPredicted RBP9.87□□□□□ -0.83
CUX1-212ENST00000547394 ASH2LQ9UBL3 628 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 DHDHQ9UQ10 334 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PTPRZ1P23471 2315 aaPredicted RBP9.87□□□□□ -0.83
CUX1-212ENST00000547394 LOC107986453A0A1B0GWG9 222 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 OR2M5A3KFT3 312 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 TP53I11O14683 189 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 TNFSF11O14788 317 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 YKT6O15498 198 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 TRAF3IP2O43734 574 aaPredicted RBP9.87□□□□□ -0.83
CUX1-212ENST00000547394 WDPCPO95876 746 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 H2BFMP0C1H6 154 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 JMJD7P0C870 316 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 CAPZA2P47755 286 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PTH2RP49190 550 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 RGS19P49795 217 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 CLDN20P56880 219 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 IFITM2Q01629 132 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 OC90Q02509 493 aaPredicted RBP9.87□□□□□ -0.83
CUX1-212ENST00000547394 RIN1Q13671 783 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PLA1AQ53H76 456 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 DCAF12Q5T6F0 453 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 DHRS13Q6UX07 377 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PPP1R32Q7Z5V6 425 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 COMMD2Q86X83 199 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.87□□□□□ -0.83
CUX1-212ENST00000547394 JAGN1Q8N5M9 183 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 OR13C3Q8NGS6 347 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 ASB5Q8WWX0 329 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 ZCCHC4Q9H5U6 513 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PTGES2Q9H7Z7 377 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 PADI1Q9ULC6 663 aa9.87□□□□□ -0.83
CUX1-212ENST00000547394 LOC102723996A0A087X1L8 192 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms