RNA–Protein interactions for RNA: ENST00000546884.1

ERBB3-205, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 2

Gene ERBB3, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-205	ENST00000546884	TVP23A	A6NH52	213 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	ATP6V1G2-DDX39B	F2Z307	99 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	HMGN1	P05114	100 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	SERPINA5	P05154	406 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	CCL2	P13500	99 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	SLC2A5	P22732	501 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	PAX7	P23759	505 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	GGT2	P36268	569 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	LSM6	P62312	80 aa	Known RBP	12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	HIST1H3A	P68431	136 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	TEK	Q02763	1124 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	SLC36A2	Q495M3	483 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZNF672	Q499Z4	452 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	CCDC92	Q53HC0	331 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	PABPC1L2A	Q5JQF8	200 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	HIST2H3PS2	Q5TEC6	136 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	PLBD1	Q6P4A8	553 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZBTB49	Q6ZSB9	765 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	HIST2H3A	Q71DI3	136 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	CPO	Q8IVL8	374 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZNF511	Q8NB15	262 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	IGFBPL1	Q8WX77	278 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	UBE2F	Q969M7	185 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	C9orf16	Q9BUW7	83 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	GRIP2	Q9C0E4	1043 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	OR2H1	Q9GZK4	316 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	WDR76	Q9H967	626 aa		12.82	□□□□□ -0.36
ERBB3-205	ENST00000546884	SPG11	Q96JI7	2443 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	LOC100509620	A0A075B734	347 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	RIIAD1	A6NNX1	92 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	SNAP29	O95721	258 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	IFNG	P01579	166 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZNF3	P17036	446 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	RPS27	P42677	84 aa	Known RBP	12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	CENPA	P49450	140 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	SNAPC1	Q16533	368 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	MSMP	Q1L6U9	139 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	FBXW10	Q5XX13	1052 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZNF774	Q6NX45	483 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	DNM1P34	Q6PK57	102 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	CORO6	Q6QEF8	472 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	DPPA2	Q7Z7J5	298 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	SYT9	Q86SS6	491 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	PROKR2	Q8NFJ6	384 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	OR2T4	Q8NH00	348 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	NANOS1	Q8WY41	292 aa	Known RBP	12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	RIBC2	Q9H4K1	309 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	RNF121	Q9H920	327 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	ASH2L	Q9UBL3	628 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	TIMM10B	Q9Y5J6	103 aa		12.81	□□□□□ -0.36
ERBB3-205	ENST00000546884	PLCE1	Q9P212	2302 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZNF469	Q96JG9	3925 aa	Predicted RBP	12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	DSCAM	O60469	2012 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	CASQ2	O14958	399 aa	Predicted RBP	12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	RER1	O15258	196 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	RAB36	O95755	333 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	DANCR	P0C864	163 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	APEX1	P27695	318 aa	Known RBP	12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	PEX2	P28328	305 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	NKX6-1	P78426	367 aa	Predicted RBP	12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	GLO1	Q04760	184 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	PCK2	Q16822	640 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	AADACL4	Q5VUY2	407 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	SLC18B1	Q6NT16	456 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	TMEM53	Q6P2H8	277 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	LINC00346	Q8IVM7	164 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	TCEANC	Q8N8B7	351 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	EME1	Q96AY2	570 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	POM121L2	Q96KW2	1035 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	OR51V1	Q9H2C8	321 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	TOR3A	Q9H497	397 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	MARCH7	Q9H992	704 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	UBTD1	Q9HAC8	227 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	PNRC2	Q9NPJ4	139 aa	Known RBP	12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	CYB5R1	Q9UHQ9	305 aa		12.8	□□□□□ -0.36
ERBB3-205	ENST00000546884	CCDC182	A6NF36	153 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	C12orf71	A8MTZ7	269 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	PRR23D1	E9PI22	279 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	HS3ST1	O14792	307 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	TLX2	O43763	284 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	GLCE	O94923	617 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	CD8A	P01732	235 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	PRR23D2	P0DMB1	279 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	GUCA1A	P43080	201 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	AQP6	Q13520	282 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	TRIP10	Q15642	601 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	LRRC36	Q1X8D7	754 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	SLC22A25	Q6T423	547 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	CFAP77	Q6ZQR2	320 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	VASH1	Q7L8A9	365 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	CXXC5	Q7LFL8	322 aa	Known RBP	12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	TIGD4	Q8IY51	512 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	ZNF611	Q8N823	705 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	SLC30A7	Q8NEW0	376 aa		12.79	□□□□□ -0.36
ERBB3-205	ENST00000546884	OR10S1	Q8NGN2	331 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms