RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PLEKHN1Q494U1 663 aaPredicted RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 USP53Q70EK8 1073 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 OR2W3Q7Z3T1 314 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF584Q8IVC4 421 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 SLC35F3Q8IY50 421 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 GABRG1Q8N1C3 465 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 OR13C9Q8NGT0 318 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 C16orf52Q8NHV5 167 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 GPR148Q8TDV2 347 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 HAVCR1Q96D42 359 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 RSRP1Q9BUV0 290 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ST6GALNAC5Q9BVH7 336 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 GPR89AB7ZAQ6 455 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 BRINP1O60477 761 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 PNPP00491 289 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 GPR89BP0CG08 455 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 NAGAP17050 411 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 CXCR1P25024 350 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 AIMP2Q13155 320 aaKnown RBP13.25□□□□□ -0.29
HOXC11-202ENST00000546378 ADAMTSL4Q6UY14 1074 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 TMPRSS11FQ6ZWK6 438 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 OR2A5Q96R48 311 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 MESP1Q9BRJ9 268 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 APMAPQ9HDC9 416 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 VSX1Q9NZR4 365 aaPredicted RBP13.25□□□□□ -0.29
HOXC11-202ENST00000546378 SLC22A7Q9Y694 548 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 MYO7BQ6PIF6 2116 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 KRBOX1C9JBD0 128 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 CTAG2O75638 210 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 TNFRSF4P43489 277 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 CHAF1BQ13112 559 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 EBPQ15125 230 aaKnown RBP13.25□□□□□ -0.29
HOXC11-202ENST00000546378 NR0B2Q15466 257 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 TRAM1Q15629 374 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 SWI5Q1ZZU3 235 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 BAIAP2L2Q6UXY1 529 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 MRGPREQ86SM8 312 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 LPAR4Q99677 370 aa13.25□□□□□ -0.29
HOXC11-202ENST00000546378 PTP4A3O75365 173 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 TGM6O95932 706 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ACAA2P42765 397 aaKnown RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 TRA2BP62995 288 aaKnown RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 MFGE8Q08431 387 aaPredicted RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ILF3Q12906 894 aaKnown RBP eCLIP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 DHRS2Q13268 280 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 IGSF11Q5DX21 431 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 RNASE10Q5GAN6 216 aaKnown RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 NKAIN2Q5VXU1 208 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF524Q96C55 264 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 C5orf34Q96MH7 638 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 SERINC2Q96SA4 455 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 CKLFQ9UBR5 152 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 M0R036 132 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ADAM10O14672 748 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 S100A6P06703 90 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 PTBP1P26599 531 aaKnown RBP eCLIP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 GPR143P51810 404 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 PPP1R1AQ13522 171 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 RIN1Q13671 783 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 BIVMQ86UB2 503 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 PUSL1Q8N0Z8 303 aaKnown RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ADAD2Q8NCV1 583 aaKnown RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 MIB2Q96AX9 1013 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 SLC41A2Q96JW4 573 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 TGM7Q96PF1 710 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 C12orf10Q9HB07 376 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 MED29Q9NX70 200 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ENTPD2Q9Y5L3 495 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 TRAV20A0A0B4J274 112 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 MBTPS2O43462 519 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 PRAF2O60831 178 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 GLSO94925 669 aaPredicted RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 TLE1Q04724 770 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF585AQ6P3V2 769 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 OVCH1Q7RTY7 1134 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 TRAPPC6BQ86SZ2 158 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 FAM71F1Q96KD3 344 aaPredicted RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 INTS14Q96SY0 518 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 ZCCHC4Q9H5U6 513 aa13.24□□□□□ -0.29
HOXC11-202ENST00000546378 NPDC1Q9NQX5 325 aaPredicted RBP13.24□□□□□ -0.29
HOXC11-202ENST00000546378 A0A1W2PP11 408 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 MPTX1A8MV57 137 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 NXPH3O95157 252 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 RENP00797 406 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 CSF2RBP32927 897 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 NR0B1P51843 470 aaKnown RBP13.23□□□□□ -0.29
HOXC11-202ENST00000546378 OR2B8PP59922 312 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 ARFRP1Q13795 201 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 PRICKLE4Q2TBC4 344 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 RNF144BQ7Z419 303 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 OR14A16Q8NHC5 309 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 MARCH1Q8TCQ1 289 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 CST11Q9H112 138 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 PRTFDC1Q9NRG1 225 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 TRAV1-2A0A0B4J238 106 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 SCDO00767 359 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms