RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, human

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCRIB-208	ENST00000546337	LRRC18	Q8N456	261 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	ATG16L2	Q8NAA4	619 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	SLC30A7	Q8NEW0	376 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	OR8D4	Q8NGM9	314 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	NEUROG1	Q92886	237 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	ZNF416	Q9BWM5	594 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	PLA2G12A	Q9BZM1	189 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	OR2H1	Q9GZK4	316 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	NDRG4	Q9ULP0	352 aa	Known RBP	13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	COA3	Q9Y2R0	106 aa	Predicted RBP	13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	PMF1-BGLAP	U3KQ54	211 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	ARID1A	O14497	2285 aa		13.6	□□□□□ -0.23
SCRIB-208	ENST00000546337	OR6C68	A6NDL8	312 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	RIIAD1	A6NNX1	92 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337		G3V2T6	193 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337		H3BN98	237 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	CD8A	P01732	235 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	SOD3	P08294	240 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	CELA3B	P08861	270 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	PATE4	P0C8F1	98 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	SERPINF1	P36955	418 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	CDK5	Q00535	292 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	PSG4	Q00888	419 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	GABPB1	Q06547	395 aa	Predicted RBP	13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	SPOCK1	Q08629	439 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	SWI5	Q1ZZU3	235 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	PABPC1L2A	Q5JQF8	200 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	SLC35F1	Q5T1Q4	408 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	C11orf71	Q6IPW1	123 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	ARL9	Q6T311	187 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	B3GLCT	Q6Y288	498 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	ZNF584	Q8IVC4	421 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	FBXO17	Q96EF6	278 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	NMNAT2	Q9BZQ4	307 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	BCL2L14	Q9BZR8	327 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	GABARAPL1	Q9H0R8	117 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	CDH20	Q9HBT6	801 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	BARX1	Q9HBU1	254 aa	Predicted RBP	13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	SRA1	Q9HD15	236 aa	Known RBP	13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	ITGB1BP2	Q9UKP3	347 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	CMAHP	Q9Y471	501 aa		13.59	□□□□□ -0.23
SCRIB-208	ENST00000546337	CSMD1	Q96PZ7	3565 aa		13.58	□□□□□ -0.23
SCRIB-208	ENST00000546337		H7C417	338 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	ZNF3	P17036	446 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	PRKACG	P22612	351 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	STOM	P27105	288 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	HIST1H3A	P68431	136 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	KPNB1	Q14974	876 aa	Known RBP	13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	HIST2H3PS2	Q5TEC6	136 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	HIST2H3A	Q71DI3	136 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	MYPOP	Q86VE0	399 aa	Predicted RBP	13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	SLC37A3	Q8NCC5	494 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	GJC3	Q8NFK1	279 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	SLC26A10	Q8NG04	563 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	MS4A3	Q96HJ5	214 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	POM121L2	Q96KW2	1035 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	DCLRE1C	Q96SD1	692 aa	Known RBP	13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	RBM4	Q9BWF3	364 aa	Known RBP	13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	SLC25A19	Q9HC21	320 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	RPRD1B	Q9NQG5	326 aa	Known RBP	13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	KIF17	Q9P2E2	1029 aa		13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337	EIF3K	Q9UBQ5	218 aa	Known RBP	13.58	□□□□□ -0.24
SCRIB-208	ENST00000546337		J3QW42	95 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	SGCE	O43556	437 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	SOX14	O95416	240 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	GAA	P10253	952 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	PAICS	P22234	425 aa	Known RBP	13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	PTH2R	P49190	550 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	GDI2	P50395	445 aa	Known RBP	13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	ERF	P50548	548 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	CRISP1	P54107	249 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	SELENOV	P59797	346 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	GINS1	Q14691	196 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	ADIPOQ	Q15848	244 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	MOG	Q16653	247 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	KDM4D	Q6B0I6	523 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	CPEB3	Q8NE35	698 aa	Known RBP	13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	SDR9C7	Q8NEX9	313 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	OR10H5	Q8NGA6	315 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	OR4Q3	Q8NH05	313 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	LRTOMT	Q8WZ04	291 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	C11orf40	Q8WZ69	217 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	COG8	Q96MW5	612 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	TSSK2	Q96PF2	358 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	PRRG3	Q9BZD7	231 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	WNT5B	Q9H1J7	359 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	PLK3	Q9H4B4	646 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	RERGL	Q9H628	205 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	ELOVL3	Q9HB03	270 aa		13.57	□□□□□ -0.24
SCRIB-208	ENST00000546337	USF3	Q68DE3	2245 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337		H3BSA7	217 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	DCTN6	O00399	190 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	SCG5	P05408	212 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	OR4A8	P0C604	315 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	ZNF23	P17027	643 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	FMO3	P31513	532 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	THBS4	P35443	961 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	DAP	P51397	102 aa		13.56	□□□□□ -0.24
SCRIB-208	ENST00000546337	UCP2	P55851	309 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms