RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PLXDC2Q6UX71 529 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 LIPHQ8WWY8 451 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 DCLRE1CQ96SD1 692 aaKnown RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 OR51B6Q9H340 312 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 NTNG1Q9Y2I2 539 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 LILRA5A6NI73 299 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 KITLGP21583 273 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 DGCR2P98153 550 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 AQP6Q13520 282 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 FAM122CQ6P4D5 195 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 SECTM1Q8WVN6 248 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 KCNE4Q8WWG9 221 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 SRRQ9GZT4 340 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 PHF1O43189 567 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 TIMM8AO60220 97 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 PRKACAP17612 351 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 BCKDHBP21953 392 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 LAP3P28838 519 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 SMAD2Q15796 467 aaKnown RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 LHFPL2Q6ZUX7 228 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 ATF6BQ99941 703 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 GSX2Q9BZM3 304 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 OR14J1Q9UGF5 321 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 POMT2Q9UKY4 750 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 POM121BA6NF01 834 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 AADACP22760 399 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF92Q03936 586 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 PRSS45Q7RTY3 260 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 CCDC190Q86UF4 302 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 C16orf52Q8NHV5 167 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 PCED1AQ9H1Q7 454 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 ANXA7P20073 488 aaKnown RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 OGFOD3Q6PK18 319 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 FAM122BQ7Z309 247 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 FRZBQ92765 325 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 CNRIP1Q96F85 164 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 OXGR1Q96P68 337 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 CDCP1Q9H5V8 836 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 PLAC1Q9HBJ0 212 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 GPATCH2Q9NW75 528 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 ZC3H12DA2A288 527 aaKnown RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 HSBP1L1C9JCN9 74 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 EIF4EP06730 217 aaKnown RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 RAE1P78406 368 aaKnown RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 ANKRD34AQ69YU3 496 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 CCDC74AQ96AQ1 378 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 INTS12Q96CB8 462 aaKnown RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 PHF7Q9BWX1 381 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 HRASLSQ9HDD0 168 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 CGGBP1Q9UFW8 167 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 MRPS2Q9Y399 296 aaKnown RBP11.42□□□□□ -0.58
COL4A6-209ENST00000545689 TIMM10BQ9Y5J6 103 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 OR51B4Q9Y5P0 310 aa11.42□□□□□ -0.58
COL4A6-209ENST00000545689 A0A0A6YYJ9 748 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 ST6GAL1P15907 406 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 RAB11AP62491 216 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 RUNX2Q13950 521 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 SLC17A1Q14916 467 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 RPS19BP1Q86WX3 136 aaKnown RBP11.41□□□□□ -0.58
COL4A6-209ENST00000545689 SLC30A7Q8NEW0 376 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF845Q96IR2 970 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-209ENST00000545689 IP6K3Q96PC2 410 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 CTRCQ99895 268 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 A4GNTQ9UNA3 340 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 F2RL1P55085 397 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 KANSL1Q7Z3B3 1105 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 TCTE3Q8IZS6 198 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 OR5D18Q8NGL1 313 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 FAM213BQ8TBF2 198 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 A0A1W2PPC4 97 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 TRIM64BA6NI03 449 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 ICOSLGO75144 302 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 RBP2P50120 134 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 LPAL2Q16609 132 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 PAN3Q58A45 887 aaKnown RBP11.41□□□□□ -0.58
COL4A6-209ENST00000545689 AVPI1Q5T686 147 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 CD300LDQ6UXZ3 194 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 ANKRD53Q8N9V6 530 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 OIT3Q8WWZ8 545 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 PIGTQ969N2 578 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF764Q96H86 408 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-209ENST00000545689 MRGPRX1Q96LB2 322 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 GCM1Q9NP62 436 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 PRELID3BQ9Y3B1 194 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 BTBD17A6NE02 478 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 SMLR1H3BR10 107 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 HOXC4P09017 264 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-209ENST00000545689 GABRB1P18505 474 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 EN2P19622 333 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-209ENST00000545689 NME2P22392 152 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 PPT1P50897 306 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 MMP15P51511 669 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 KIAA0040Q15053 153 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 ATPAF1Q5TC12 328 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-209ENST00000545689 HIST2H3AQ71DI3 136 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 BBS1Q8NFJ9 593 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 APH1AQ96BI3 265 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 FOXJ3Q9UPW0 622 aa11.41□□□□□ -0.58
COL4A6-209ENST00000545689 DUSP1P28562 367 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms