RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 SIAEQ9HAT2 523 aa7.2□□□□□ -1.26
USP28-215ENST00000545608 G6PC2Q9NQR9 355 aa7.2□□□□□ -1.26
USP28-215ENST00000545608 BAG5Q9UL15 447 aa7.2□□□□□ -1.26
USP28-215ENST00000545608 WIPI2Q9Y4P8 454 aa7.2□□□□□ -1.26
USP28-215ENST00000545608 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 LOC105371242A0A075B767 164 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 TRAV20A0A0B4J274 112 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 TPD52L2O43399 206 aaKnown RBP7.19□□□□□ -1.26
USP28-215ENST00000545608 SPRY3O43610 288 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 PLPP2O43688 288 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 PIP5K1CO60331 668 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 MPZL1O95297 269 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 IGF2P01344 180 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 IGHV1-46P01743 117 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 ANPEPP15144 967 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 MAKP20794 623 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 DRD4P21917 467 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 STOMP27105 288 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 CFPP27918 469 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 MPV17P39210 176 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 ZNF81P51508 661 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 MMP15P51511 669 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 ERVK-25P63136 954 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 PSG4Q00888 419 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 TEKQ02763 1124 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 HNRNPA0Q13151 305 aaKnown RBP7.19□□□□□ -1.26
USP28-215ENST00000545608 MOGQ16653 247 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 ZNF718Q3SXZ3 478 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 MMEL1Q495T6 779 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 SPRNQ5BIV9 151 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 SPATA46Q5T0L3 261 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 METTL21CQ5VZV1 264 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 SHQ1Q6PI26 577 aaKnown RBP7.19□□□□□ -1.26
USP28-215ENST00000545608 CLDN22Q8N7P3 220 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 LRRC75AQ8NAA5 344 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 OR8J3Q8NGG0 315 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 SLC25A40Q8TBP6 338 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 C10orf82Q8WW14 230 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 MARS2Q96GW9 593 aaKnown RBP7.19□□□□□ -1.26
USP28-215ENST00000545608 TMEM120AQ9BXJ8 343 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 KCNN2Q9H2S1 579 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 TXNIPQ9H3M7 391 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 CCNB1IP1Q9NPC3 277 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 DECR2Q9NUI1 292 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 MED31Q9Y3C7 131 aa7.19□□□□□ -1.26
USP28-215ENST00000545608 C5orf49A4QMS7 147 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 ZSCAN5BA6NJL1 495 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 MRASO14807 208 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 FAM107AO95990 144 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 PNPP00491 289 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 NGFP01138 241 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 IGHV2-5P01817 119 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 VIMP08670 466 aaKnown RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 THRBP10828 461 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 IFI30P13284 250 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 LAP3P28838 519 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 GCH1P30793 250 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 KDELR2P33947 212 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 RBMXP38159 391 aaKnown RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 GDI2P50395 445 aaKnown RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 CTXN1P60606 82 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 CD47Q08722 323 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 SF3A3Q12874 501 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP28-215ENST00000545608 KLF10Q13118 480 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 TOP3AQ13472 1001 aaPredicted RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 CYBRD1Q53TN4 286 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 ALG10Q5BKT4 473 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 FAM27BQ5VT28 67 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 ERICH5Q6P6B1 374 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 RFPL4BQ6ZWI9 263 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 HDDC2Q7Z4H3 204 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 IGFN1Q86VF2 1251 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 SVOPQ8N4V2 548 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 KLF14Q8TD94 323 aaPredicted RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 ZNF418Q8TF45 676 aaPredicted RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 ZFAND2BQ8WV99 257 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 IPCEF1Q8WWN9 437 aaPredicted RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 CCL17Q92583 94 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 RAB39BQ96DA2 213 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 SH3GL1Q99961 368 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 SIKE1Q9BRV8 207 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 OR2H1Q9GZK4 316 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 OR2J1Q9GZK6 312 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 POLR2J2Q9GZM3 115 aaKnown RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 POLR2J3Q9H1A7 115 aaKnown RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 WNT5BQ9H1J7 359 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 SAP30LQ9HAJ7 183 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 SMURF2Q9HAU4 748 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 STX18Q9P2W9 335 aaKnown RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 EIF3KQ9UBQ5 218 aaKnown RBP7.18□□□□□ -1.26
USP28-215ENST00000545608 KLHL21Q9UJP4 597 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 A4GNTQ9UNA3 340 aa7.18□□□□□ -1.26
USP28-215ENST00000545608 TRAV27A0A087WT01 109 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 LOC100653049A0A140TA62 436 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 NPIPB13A6NJU9 1138 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 CLDN25C9JDP6 229 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 NPIPB4C9JG80 1138 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 KRT34O76011 436 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 UBOX5O94941 541 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 NPPAP01160 153 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms