RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 UBE2FQ969M7 185 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 KCNN2Q9H2S1 579 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 TMEM38AQ9H6F2 299 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 ELOVL3Q9HB03 270 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 MAN2C1Q9NTJ4 1040 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 SLC25A37Q9NYZ2 338 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 MIOXQ9UGB7 285 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 DOCK11Q5JSL3 2073 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 IGKV1D-43A0A0B4J1Z2 117 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 C5orf63A6NC05 138 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 NPIPB13A6NJU9 1138 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 NPIPB4C9JG80 1138 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 HDAC3O15379 428 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 ERLIN1O75477 346 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 TGDSO95455 350 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 TSPAN15O95858 294 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 ACADSP16219 412 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 POLR2JP52435 117 aaKnown RBP12.28□□□□□ -0.44
RTN3-214ENST00000545432 UGT2B15P54855 530 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 CLRN1P58418 232 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 ARMC4Q5T2S8 1044 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 BRD3OSQ6XYD6 125 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 FOXL2NBQ6ZUU3 175 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 RANBP3LQ86VV4 465 aaPredicted RBP12.28□□□□□ -0.44
RTN3-214ENST00000545432 KLBQ86Z14 1044 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 FITM2Q8N6M3 262 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 VANGL1Q8TAA9 524 aaPredicted RBP12.28□□□□□ -0.44
RTN3-214ENST00000545432 ABHD4Q8TB40 342 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 ASB10Q8WXI3 467 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 DYRK2Q92630 601 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 ZDHHC16Q969W1 377 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 C4orf45Q96LM5 186 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 OR2H1Q9GZK4 316 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 C16orf95Q9H693 158 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 MARCH7Q9H992 704 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 NANOGQ9H9S0 305 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 CCNB1IP1Q9NPC3 277 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 TBCCD1Q9NVR7 557 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 PPP1R3CQ9UQK1 317 aa12.28□□□□□ -0.44
RTN3-214ENST00000545432 SURF4O15260 269 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 IGF2P01344 180 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 GPX2P18283 190 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 BGNP21810 368 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 TNFSF4P23510 183 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 CDAP32320 146 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 MRPL19P49406 292 aaKnown RBP12.27□□□□□ -0.45
RTN3-214ENST00000545432 MMP16P51512 607 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 PCBP3P57721 371 aaKnown RBP12.27□□□□□ -0.45
RTN3-214ENST00000545432 BST1Q10588 318 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 MPP2Q14168 576 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 NPTX1Q15818 432 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 ZNF181Q2M3W8 571 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 C6orf10Q5SRN2 563 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 GCNT6Q5T4J0 391 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 ALDH16A1Q8IZ83 802 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 ZSCAN4Q8NAM6 433 aaPredicted RBP12.27□□□□□ -0.45
RTN3-214ENST00000545432 AKR7LQ8NHP1 331 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 ITLN1Q8WWA0 313 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 SSMEM1Q8WWF3 244 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 LIPHQ8WWY8 451 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 HAVCR1Q96D42 359 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 MPP4Q96JB8 637 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 MCHR1Q99705 422 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 SLC30A2Q9BRI3 323 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 PCDHAC1Q9H158 963 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 ASH2LQ9UBL3 628 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 TIMM10BQ9Y5J6 103 aa12.27□□□□□ -0.45
RTN3-214ENST00000545432 TRBV5-3A0A0A0MS03 114 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 TRPC5OSA6NMA1 111 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 TIMM8AO60220 97 aaPredicted RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 SNNO75324 88 aaPredicted RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 SLC2A10O95528 541 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 CST2P09228 141 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 COX5BP10606 129 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 THRBP10828 461 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 ARHGDIAP52565 204 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 GNB2P62879 340 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 SAMD5Q5TGI4 173 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 TTC33Q6PID6 262 aaPredicted RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 ZNF841Q6ZN19 808 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 HDDC2Q7Z4H3 204 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 SYT9Q86SS6 491 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 TSPYL5Q86VY4 417 aaPredicted RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 NPEPL1Q8NDH3 523 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 OR6T1Q8NGN1 323 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 OR9I1Q8NGQ6 314 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 PLEKHA8Q96JA3 519 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 PRSS27Q9BQR3 290 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 TMEM246Q9BRR3 403 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 WACQ9BTA9 647 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 MEPEQ9NQ76 525 aaPredicted RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 SLAMF8Q9P0V8 285 aa12.26□□□□□ -0.45
RTN3-214ENST00000545432 STX18Q9P2W9 335 aaKnown RBP12.26□□□□□ -0.45
RTN3-214ENST00000545432 SERPINB7O75635 380 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 HIST1H2ABP04908 130 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 MMP9P14780 707 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms