RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 AASSQ9UDR5 926 aa11.37□□□□□ -0.59
CDCA3-210ENST00000545368 RPL36Q9Y3U8 105 aaKnown RBP11.37□□□□□ -0.59
CDCA3-210ENST00000545368 FLNCQ14315 2725 aa11.37□□□□□ -0.59
CDCA3-210ENST00000545368 USP9XQ93008 2570 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-210ENST00000545368 A0A1W2PR80 420 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 RAB36O95755 333 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 HLA-HP01893 362 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 SCG5P05408 212 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 SPARCP09486 303 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 ATP6V1E1P36543 226 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 ARR3P36575 388 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 NAA10P41227 235 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-210ENST00000545368 MTNR1AP48039 350 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 NUDT6P53370 316 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 TUBA1BP68363 451 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 TUBA4AP68366 448 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 SCRN3Q0VDG4 424 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 CDK5R2Q13319 367 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 GGTLC2Q14390 218 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 TAB1Q15750 504 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 ALKBH2Q6NS38 261 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 UGT2A3Q6UWM9 527 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 B3GLCTQ6Y288 498 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 SHFQ7M4L6 423 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 SYT9Q86SS6 491 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 OR51G2Q8NGK0 314 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 ZC3HAV1LQ96H79 300 aaKnown RBP11.36□□□□□ -0.59
CDCA3-210ENST00000545368 WDR76Q9H967 626 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 HAO2Q9NYQ3 351 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 ASH2LQ9UBL3 628 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 FBXL3Q9UKT7 428 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 SLC25A15Q9Y619 301 aa11.36□□□□□ -0.59
CDCA3-210ENST00000545368 ZNF593O00488 134 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-210ENST00000545368 DENRO43583 198 aaKnown RBP11.35□□□□□ -0.59
CDCA3-210ENST00000545368 SELENOFO60613 162 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 WBP4O75554 376 aaKnown RBP11.35□□□□□ -0.59
CDCA3-210ENST00000545368 MRPL3P09001 348 aaKnown RBP11.35□□□□□ -0.59
CDCA3-210ENST00000545368 DBTP11182 482 aaKnown RBP11.35□□□□□ -0.59
CDCA3-210ENST00000545368 ZNF32P17041 273 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 KIR2DL3P43628 341 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 RAB1AP62820 205 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 PLP2Q04941 152 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 ZNF91Q05481 1191 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 PIGFQ07326 219 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 TEX30Q5JUR7 227 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 OTPQ5XKR4 325 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 SLC16A9Q7RTY1 509 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 MDP1Q86V88 176 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 WFDC8Q8IUA0 241 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 LINC00346Q8IVM7 164 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 TIGD4Q8IY51 512 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 WDR31Q8NA23 367 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 GJC3Q8NFK1 279 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 LINC01560Q8TB33 94 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 FBLIM1Q8WUP2 373 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 FBXO17Q96EF6 278 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 RNFT2Q96EX2 444 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 DACH2Q96NX9 599 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 WFIKKN1Q96NZ8 548 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 MNTQ99583 582 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 YIPF3Q9GZM5 350 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 NGBQ9NPG2 151 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 ZNF224Q9NZL3 707 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 TIMM10BQ9Y5J6 103 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 TMEM14AQ9Y6G1 99 aa11.35□□□□□ -0.59
CDCA3-210ENST00000545368 IQCMA0A1B0GVH7 501 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 IRGMA1A4Y4 181 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 A1L4Q6 167 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 C19orf84I3L1E1 186 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 CASKO14936 926 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 PTHP01270 115 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 MMP7P09237 267 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-210ENST00000545368 SBK2P0C263 348 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 PATE4P0C8F1 98 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 CBR1P16152 277 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 CSNK2BP67870 215 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 MED21Q13503 144 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 SNTB1Q13884 538 aaKnown RBP11.34□□□□□ -0.59
CDCA3-210ENST00000545368 EIF2B1Q14232 305 aaKnown RBP11.34□□□□□ -0.59
CDCA3-210ENST00000545368 SMN1Q16637 294 aaKnown RBP11.34□□□□□ -0.59
CDCA3-210ENST00000545368 PCK2Q16822 640 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 KLHL22Q53GT1 634 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 SLC18B1Q6NT16 456 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 DPY19L4Q7Z388 723 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 SLC35F2Q8IXU6 374 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 ALDH16A1Q8IZ83 802 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 ZNF454Q8N9F8 522 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 OR2H1Q9GZK4 316 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 C1orf198Q9H425 327 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 ADGRL4Q9HBW9 690 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 CYB5R1Q9UHQ9 305 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 LAMP5Q9UJQ1 280 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 GDF2Q9UK05 429 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-210ENST00000545368 PCDHGB1Q9Y5G3 927 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 LHFPL6Q9Y693 200 aa11.34□□□□□ -0.59
CDCA3-210ENST00000545368 ZNF503-AS2A6NEH8 195 aa11.33□□□□□ -0.6
CDCA3-210ENST00000545368 ZNF670-ZNF695F2Z2N8 137 aa11.33□□□□□ -0.6
CDCA3-210ENST00000545368 M0R1B8 84 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms