RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 LUZP4Q9P127 313 aa11.67□□□□□ -0.54
CHD4-211ENST00000544484 SOD1P00441 154 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 ANXA7P20073 488 aaKnown RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 SOX18P35713 384 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 CCL7P80098 99 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 IAH1Q2TAA2 248 aaPredicted RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 WDR5BQ86VZ2 330 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 RIMKLAQ8IXN7 391 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 ORAI1Q96D31 301 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 GABARAPL3Q9BY60 117 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 BCL2L10Q9HD36 194 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 KIF25Q9UIL4 384 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 NME2P22392 152 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 CHATP28329 748 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 KIRREL2Q6UWL6 708 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 PHYHIPQ92561 330 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 RNF32Q9H0A6 362 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 TPRP12270 2363 aaKnown RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 A0A087WV62 115 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 A0A0B4J203 849 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 CCSO14618 274 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 FAM109BQ6ICB4 259 aaPredicted RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 SSC5DA1L4H1 1573 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 LMO7DNF2Z398 122 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 TGM4P49221 684 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 DIO1P49895 249 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 RPS27AP62979 156 aaKnown RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 UBA52P62987 128 aaKnown RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 FAM53BQ14153 422 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 PEA15Q15121 130 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 SLC22A13Q9Y226 551 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 PIPP12273 146 aaPredicted RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 TBXA2RP21731 343 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 ZNF468Q5VIY5 522 aaPredicted RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 DOK3Q7L591 496 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 SCCPDHQ8NBX0 429 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 UPRTQ96BW1 309 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 CTSFQ9UBX1 484 aa11.66□□□□□ -0.54
CHD4-211ENST00000544484 YBX2Q9Y2T7 364 aaKnown RBP11.66□□□□□ -0.54
CHD4-211ENST00000544484 HRO43593 1189 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 CCR9P51686 369 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 HLA-BQ31612 363 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 LACC1Q8IV20 430 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 OR52I2Q8NH67 350 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 FAM213BQ8TBF2 198 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 ZNF355PQ9NSJ1 428 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 KCNG2Q9UJ96 466 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 ZNF225Q9UK10 706 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 ACHEP22303 614 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 OR10A3P58181 314 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 PPIAP62937 165 aaKnown RBP11.65□□□□□ -0.54
CHD4-211ENST00000544484 SLC10A1Q14973 349 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 TMEM71Q6P5X7 295 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 USP51Q70EK9 711 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 ANKRD9Q96BM1 317 aaPredicted RBP11.65□□□□□ -0.54
CHD4-211ENST00000544484 AP1S3Q96PC3 154 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 GON7Q9BXV9 100 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 CNTNAP3Q9BZ76 1288 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 GPATCH2Q9NW75 528 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 DNAJC13O75165 2243 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 A0A0A6YYD5 115 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 OR6C76A6NM76 312 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 ZNF732B4DXR9 585 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 DEGS1O15121 323 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 PPT1P50897 306 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 HTD2P86397 168 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 SELENBP1Q13228 472 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 ATPAF1Q5TC12 328 aaPredicted RBP11.65□□□□□ -0.54
CHD4-211ENST00000544484 BORCS7Q96B45 105 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 MVB12AQ96EY5 273 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 GABARAPL1Q9H0R8 117 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 UGT2A1Q9Y4X1 527 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 ATG2BQ96BY7 2078 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 A0A0D9SG52 128 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 A8MXE2 369 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 E9PI62 339 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 VAMP5O95183 116 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 WNT11O96014 354 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 GLULP15104 373 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 CHRNB4P30926 498 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 RFPL4BQ6ZWI9 263 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 OR4A16Q8NH70 328 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 MAFAQ8NHW3 353 aaPredicted RBP11.65□□□□□ -0.54
CHD4-211ENST00000544484 TRIB1Q96RU8 372 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 KCNJ15Q99712 375 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 KIAA1551Q9HCM1 1747 aa11.65□□□□□ -0.54
CHD4-211ENST00000544484 PPP3CBP16298 524 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 PRKACAP17612 351 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 RNF4P78317 190 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 RHOUQ7L0Q8 258 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 AMER3Q8N944 861 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 OR51H1Q8NH63 302 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 UCN3Q969E3 161 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 PPP1R14DQ9NXH3 145 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 DOCK2Q92608 1830 aa11.65□□□□□ -0.55
CHD4-211ENST00000544484 SCN1AP35498 2009 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms