RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 GUCA1AP43080 201 aaPredicted RBP19.1■□□□□ 0.65
CDKN3-207ENST00000543789 CRYBA2P53672 197 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 PCBD1P61457 104 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 TNFAIP6P98066 277 aaPredicted RBP19.1■□□□□ 0.65
CDKN3-207ENST00000543789 ARMCX4Q5H9R4 360 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 MTX3Q5HYI7 312 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 C4orf45Q96LM5 186 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 RBP7Q96R05 134 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 ALG12Q9BV10 488 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 POLR2J2Q9GZM3 115 aaKnown RBP19.1■□□□□ 0.65
CDKN3-207ENST00000543789 POLR2J3Q9H1A7 115 aaKnown RBP19.1■□□□□ 0.65
CDKN3-207ENST00000543789 PLEK2Q9NYT0 353 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 EGFL7Q9UHF1 273 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 POLR3KQ9Y2Y1 108 aaPredicted RBP19.1■□□□□ 0.65
CDKN3-207ENST00000543789 AUP1Q9Y679 476 aa19.1■□□□□ 0.65
CDKN3-207ENST00000543789 ICMTO60725 284 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 OR5F1O95221 314 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 CST2P09228 141 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 GZMMP51124 257 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 ZNF154Q13106 437 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 CDK5R2Q13319 367 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 PIN1Q13526 163 aaPredicted RBP19.09■□□□□ 0.65
CDKN3-207ENST00000543789 TAF11Q15544 211 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 ZER1Q7Z7L7 766 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 KLHL36Q8N4N3 616 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 SPICQ8N5J4 248 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 TSPEARQ8WU66 669 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 DUX5Q96PT3 197 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 C1QTNF5Q9BXJ0 243 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 ZMAT3Q9HA38 289 aaKnown RBP19.09■□□□□ 0.65
CDKN3-207ENST00000543789 TMEM106BQ9NUM4 274 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 DCAF16Q9NXF7 216 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 ZNF69Q9UC07 566 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 BAG5Q9UL15 447 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 MED31Q9Y3C7 131 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 WNK2Q9Y3S1 2297 aa19.09■□□□□ 0.65
CDKN3-207ENST00000543789 TRAPPC2LH3BP13 241 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 TIMM8AO60220 97 aaPredicted RBP19.08■□□□□ 0.64
CDKN3-207ENST00000543789 IGHMP01871 453 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 TNFRSF1BP20333 461 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 PSG7Q13046 419 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 HNRNPA0Q13151 305 aaKnown RBP19.08■□□□□ 0.64
CDKN3-207ENST00000543789 TOP3AQ13472 1001 aaPredicted RBP19.08■□□□□ 0.64
CDKN3-207ENST00000543789 ALG10Q5BKT4 473 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 AGBL2Q5U5Z8 902 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 ARL9Q6T311 187 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 FNDC8Q8TC99 324 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 SAMD8Q96LT4 415 aa19.08■□□□□ 0.64
CDKN3-207ENST00000543789 PATZ1Q9HBE1 687 aaKnown RBP19.08■□□□□ 0.64
CDKN3-207ENST00000543789 DNAJC9-AS1A6NH13 148 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 SHOX2O60902 331 aaPredicted RBP19.07■□□□□ 0.64
CDKN3-207ENST00000543789 TNFSF4P23510 183 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 SLC6A9P48067 706 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 BAMBIQ13145 260 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 TMEM155Q4W5P6 130 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 KLF17Q5JT82 389 aaPredicted RBP19.07■□□□□ 0.64
CDKN3-207ENST00000543789 ZNF774Q6NX45 483 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 LRRC28Q86X40 367 aaPredicted RBP19.07■□□□□ 0.64
CDKN3-207ENST00000543789 BCL6BQ8N143 479 aaPredicted RBP19.07■□□□□ 0.64
CDKN3-207ENST00000543789 CLDN22Q8N7P3 220 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 INSIG2Q9Y5U4 225 aa19.07■□□□□ 0.64
CDKN3-207ENST00000543789 THRBP10828 461 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 ZNF12P17014 697 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 TNFRSF1AP19438 455 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 GSTM3P21266 225 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 RPL27P61353 136 aaKnown RBP19.06■□□□□ 0.64
CDKN3-207ENST00000543789 BEND6Q5SZJ8 279 aaPredicted RBP19.06■□□□□ 0.64
CDKN3-207ENST00000543789 ZNF283Q8N7M2 679 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 DYDC1Q8WWB3 177 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 STON2Q8WXE9 905 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 MRI1Q9BV20 369 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 MAN2C1Q9NTJ4 1040 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 NDRG4Q9ULP0 352 aaKnown RBP19.06■□□□□ 0.64
CDKN3-207ENST00000543789 HIF3AQ9Y2N7 669 aa19.06■□□□□ 0.64
CDKN3-207ENST00000543789 TUBG1P23258 451 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 RBMXP38159 391 aaKnown RBP19.05■□□□□ 0.64
CDKN3-207ENST00000543789 OR1E2P47887 323 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 CYLC2Q14093 348 aaPredicted RBP19.05■□□□□ 0.64
CDKN3-207ENST00000543789 NANOGP8Q6NSW7 305 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 FOXL2NBQ6ZUU3 175 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 SYT9Q86SS6 491 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 OR2Z1Q8NG97 314 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 C1orf147Q96MC9 270 aaPredicted RBP19.05■□□□□ 0.64
CDKN3-207ENST00000543789 ZNF48Q96MX3 618 aaPredicted RBP19.05■□□□□ 0.64
CDKN3-207ENST00000543789 SH3GL1Q99961 368 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 UNKLQ9H9P5 680 aaKnown RBP19.05■□□□□ 0.64
CDKN3-207ENST00000543789 TUBG2Q9NRH3 451 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 TBCCD1Q9NVR7 557 aa19.05■□□□□ 0.64
CDKN3-207ENST00000543789 A0A1W2PPL8 197 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 C12orf71A8MTZ7 269 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 ABHD16AO95870 558 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 CTXN1P60606 82 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 SEC61A1P61619 476 aaKnown RBP19.04■□□□□ 0.64
CDKN3-207ENST00000543789 BTG1P62324 171 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 ENDOGQ14249 297 aaKnown RBP19.04■□□□□ 0.64
CDKN3-207ENST00000543789 FAM205BPQ63HN1 556 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 SLC25A28Q96A46 364 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 THOC1Q96FV9 657 aaKnown RBP19.04■□□□□ 0.64
CDKN3-207ENST00000543789 ECSITQ9BQ95 431 aa19.04■□□□□ 0.64
CDKN3-207ENST00000543789 HTR3EA5X5Y0 456 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms