RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LINC00346Q8IVM7 164 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 GID4Q8IVV7 300 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 DHRSXQ8N5I4 330 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 PACRGLQ8N7B6 248 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ZNF511Q8NB15 262 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ACBD4Q8NC06 268 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 SLC30A7Q8NEW0 376 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 GJC3Q8NFK1 279 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 IL17RDQ8NFM7 739 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 KBTBD8Q8NFY9 601 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 OR6N2Q8NGY6 317 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 FGFBP3Q8TAT2 258 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 TMEM163Q8TC26 289 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 NABP1Q96AH0 204 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ZMYND19Q96E35 227 aaPredicted RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 FBXO17Q96EF6 278 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 C14orf79Q96F83 325 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 MS4A3Q96HJ5 214 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 BOD1Q96IK1 185 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 RDH12Q96NR8 316 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 INTS14Q96SY0 518 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 MBOAT4Q96T53 435 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 PITX2Q99697 317 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 APOL4Q9BPW4 351 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 WACQ9BTA9 647 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 OR2H1Q9GZK4 316 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 C1orf198Q9H425 327 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 HINT3Q9NQE9 182 aaKnown RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 RASSF1Q9NS23 344 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 PLEK2Q9NYT0 353 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 NPAP1Q9NZP6 1156 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ASH2LQ9UBL3 628 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 EIF3KQ9UBQ5 218 aaKnown RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 NKX1-2Q9UD57 310 aaPredicted RBP5.5□□□□□ -1.53
LTBR-212ENST00000543542 EDARQ9UNE0 448 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 MOKQ9UQ07 419 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 ADGRG4Q8IZF6 3080 aa5.5□□□□□ -1.53
LTBR-212ENST00000543542 DOPEY2Q9Y3R5 2298 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 USP9XQ93008 2570 aaPredicted RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 C5orf49A4QMS7 147 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SLC22A31A6NKX4 558 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SNTNA6NMZ2 147 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 DEFB108AA8MXU0 73 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 ATP6V1G2-DDX39BF2Z307 99 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 ZNF593O00488 134 aaPredicted RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 CASQ2O14958 399 aaPredicted RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 PRODHO43272 600 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SGCEO43556 437 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 CTAG2O75638 210 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 PLAUP00749 431 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 IGKV3-15P01624 115 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 TFP02787 698 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SERPINA5P05154 406 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 MRPL3P09001 348 aaKnown RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 GAAP10253 952 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 CCL2P13500 99 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 STOMP27105 288 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 APEX1P27695 318 aaKnown RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 NAA10P41227 235 aaPredicted RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 RPS27P42677 84 aaKnown RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 HTR5AP47898 357 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 ENTPD1P49961 510 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 FABP6P51161 128 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 PSG4Q00888 419 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 IL5RAQ01344 420 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 NAAAQ02083 359 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SPOCK1Q08629 439 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 EIF2B1Q14232 305 aaKnown RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 ENDOGQ14249 297 aaKnown RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 KCNMB1Q16558 191 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 C3orf36Q3SXR2 165 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SLC35D3Q5M8T2 416 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 ZNF362Q5T0B9 420 aaPredicted RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 OGFRL1Q5TC84 451 aaPredicted RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 NXNL2Q5VZ03 156 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 TTC23Q5W5X9 447 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 CRYBG3Q68DQ2 2970 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 KRT80Q6KB66 452 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 ZNF774Q6NX45 483 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 CORO6Q6QEF8 472 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 ARL9Q6T311 187 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 LYPD4Q6UWN0 246 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 UNQ6126/PRO20091Q6UXV3 157 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SHFQ7M4L6 423 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 BCDIN3DQ7Z5W3 292 aaKnown RBP5.49□□□□□ -1.53
LTBR-212ENST00000543542 SYT9Q86SS6 491 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 CDC20BQ86Y33 519 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 ZNF295-AS1Q8N0V1 137 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SETD9Q8NE22 299 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 BBS1Q8NFJ9 593 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 SLC26A10Q8NG04 563 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 OR8J1Q8NGP2 316 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 THEM6Q8WUY1 208 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 AKAP1Q92667 903 aaKnown RBP eCLIP5.49□□□□□ -1.53
LTBR-212ENST00000543542 PTP4A1Q93096 173 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 RFKQ969G6 155 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 FBXW5Q969U6 566 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 HRASLS5Q96KN8 279 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 HS3ST6Q96QI5 342 aa5.49□□□□□ -1.53
LTBR-212ENST00000543542 HCAR1Q9BXC0 346 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms