RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 A0A1B0GX78 115 aa12□□□□□ -0.49
TNC-212ENST00000542877 LGALS8O00214 317 aa12□□□□□ -0.49
TNC-212ENST00000542877 IGLV3-27P01718 113 aa12□□□□□ -0.49
TNC-212ENST00000542877 CTXN2P0C2S0 81 aa12□□□□□ -0.49
TNC-212ENST00000542877 IRS1P35568 1242 aa12□□□□□ -0.49
TNC-212ENST00000542877 EGR3Q06889 387 aa12□□□□□ -0.49
TNC-212ENST00000542877 KIAA0141Q14154 515 aaPredicted RBP12□□□□□ -0.49
TNC-212ENST00000542877 SMIM15Q7Z3B0 74 aa12□□□□□ -0.49
TNC-212ENST00000542877 C1orf87Q8N0U7 546 aa12□□□□□ -0.49
TNC-212ENST00000542877 SFT2D1Q8WV19 159 aa12□□□□□ -0.49
TNC-212ENST00000542877 ZNF75AQ96N20 296 aa12□□□□□ -0.49
TNC-212ENST00000542877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 A0A1B0GUH1 482 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 TUBAL3A6NHL2 446 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 ALOX12BO75342 701 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CHRNB4P30926 498 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 LPAL2Q16609 132 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CYHR1Q6ZMK1 362 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CCDC71Q8IV32 467 aaPredicted RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 RBMXL3Q8N7X1 1067 aaKnown RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 SUMF1Q8NBK3 374 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 ASB13Q8WXK3 278 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 M0R082 166 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 H2AFB1P0C5Y9 115 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 OR13C7P0DN81 318 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CBR1P16152 277 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CD1CP29017 333 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 TGFBR1P36897 503 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 RAD52P43351 418 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CSNK1EP49674 416 aaKnown RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 GZMKP49863 264 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 PYCR3Q53H96 274 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 ST8SIA4Q92187 359 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 KCNJ15Q99712 375 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 BANF2Q9H503 90 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 MN1Q10571 1320 aaPredicted RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 IFITM5A6NNB3 132 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 K7ESM1 405 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 BHLHE40O14503 412 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 ABOP16442 354 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 ADRA2CP18825 462 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 HABP2Q14520 560 aaPredicted RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 MAML2Q8IZL2 1156 aaPredicted RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 C10orf90Q96M02 699 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 PLK3Q9H4B4 646 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CALHM2Q9HA72 323 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 SPACA1Q9HBV2 294 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CHRNA9Q9UGM1 479 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 SPINT2O43291 252 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 EIF4EP06730 217 aaKnown RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 PSMB6P28072 239 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 ARRB2P32121 409 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 AQP6Q13520 282 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 BARHL1Q9BZE3 327 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 LTB4R2Q9NPC1 389 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 CHST11Q9NPF2 352 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 HEYLQ9NQ87 328 aaPredicted RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 MBNL1Q9NR56 388 aaKnown RBP11.99□□□□□ -0.49
TNC-212ENST00000542877 PADI1Q9ULC6 663 aa11.99□□□□□ -0.49
TNC-212ENST00000542877 TRBV5-4A0A0C4DH59 114 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 STMND1H3BQB6 276 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 AKR7A3O95154 331 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CDK5R1Q15078 307 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 ADAM5Q6NVV9 412 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 TMEM71Q6P5X7 295 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CPEB2Q7Z5Q1 589 aaKnown RBP11.98□□□□□ -0.49
TNC-212ENST00000542877 SKA3Q8IX90 412 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CMTM4Q8IZR5 234 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 BCORP1Q8N888 145 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 OR13H1Q8NG92 308 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 ZFP92A6NM28 416 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 HSD17B6O14756 317 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 VAMP5O95183 116 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CD22P20273 847 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 ALOX5APP20292 161 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 HSF1Q00613 529 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 TOR2AQ5JU69 321 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 NLRC3Q7RTR2 1065 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 ARIH2OSQ8N7S6 290 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 FGF22Q9HCT0 170 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 OR6C76A6NM76 312 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A6P0DMU7 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A5P0DMU8 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A7P0DMV0 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A8P0DMV1 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A9P0DMV2 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 TBPP20226 339 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 ZNF77Q15935 545 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 EXT1Q16394 746 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A2Q5DJT8 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A1Q5HYN5 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CT45A3Q8NHU0 189 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 APH1BQ8WW43 257 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 BSCL2Q96G97 398 aaPredicted RBP11.98□□□□□ -0.49
TNC-212ENST00000542877 SRRQ9GZT4 340 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 LAT2Q9GZY6 243 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 OCEL1Q9H607 264 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 GAREM1Q9H706 876 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms