RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 TVP23AA6NH52 213 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 SLC22A31A6NKX4 558 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 CLIC3O95833 236 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 CBR1P16152 277 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 ZNF823P16415 610 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 GSTT1P30711 240 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 ARR3P36575 388 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 PIGFQ07326 219 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 ENDOGQ14249 297 aaKnown RBP14.94□□□□□ -0.02
LIG1-204ENST00000542460 OCLNQ16625 522 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 MEP1BQ16820 701 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.94□□□□□ -0.02
LIG1-204ENST00000542460 WFDC8Q8IUA0 241 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 FAM169BQ8N8A8 192 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 FGFBP3Q8TAT2 258 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 RFKQ969G6 155 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 FBXO17Q96EF6 278 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 CDADC1Q9BWV3 514 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 RNF121Q9H920 327 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 CCNB1IP1Q9NPC3 277 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 PLEKHB1Q9UF11 243 aaPredicted RBP14.94□□□□□ -0.02
LIG1-204ENST00000542460 KCNG2Q9UJ96 466 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 TIMM10BQ9Y5J6 103 aa14.94□□□□□ -0.02
LIG1-204ENST00000542460 NAV2Q8IVL1 2488 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 MMP7P09237 267 aaPredicted RBP14.93□□□□□ -0.02
LIG1-204ENST00000542460 PATE4P0C8F1 98 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 GABRB1P18505 474 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 ADAM8P78325 824 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 IL5RAQ01344 420 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 AQP6Q13520 282 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 C6orf52Q5T4I8 152 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 LCN1P1Q5VSP4 162 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 OTPQ5XKR4 325 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 TMEM53Q6P2H8 277 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 LYPD4Q6UWN0 246 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 MDP1Q86V88 176 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 ZMYND19Q96E35 227 aaPredicted RBP14.93□□□□□ -0.02
LIG1-204ENST00000542460 Q96MT0 163 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 ZNF582Q96NG8 517 aaPredicted RBP14.93□□□□□ -0.02
LIG1-204ENST00000542460 C1QTNF6Q9BXI9 259 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 MARCH7Q9H992 704 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 DNAJC27Q9NZQ0 273 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 POLR1DQ9Y2S0 133 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 COMMD3-BMI1R4GMX3 469 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 HSPE1-MOB4S4R3N1 261 aa14.93□□□□□ -0.02
LIG1-204ENST00000542460 CCDC182A6NF36 153 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 SNTNA6NMZ2 147 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 TMCC2O75069 709 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 RAB36O95755 333 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 GNAO1P09471 354 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 COX6B1P14854 86 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 ZNF32P17041 273 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 CRYGSP22914 178 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 CDH11P55287 796 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 ISL1P61371 349 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 SEZ6L2Q6UXD5 910 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 USP51Q70EK9 711 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 C8orf59Q8N0T1 100 aaPredicted RBP14.92□□□□□ -0.02
LIG1-204ENST00000542460 INTS14Q96SY0 518 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 WDR76Q9H967 626 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 CLN6Q9NWW5 311 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 CRNNQ9UBG3 495 aaPredicted RBP14.92□□□□□ -0.02
LIG1-204ENST00000542460 ASH2LQ9UBL3 628 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 KCNN3Q9UGI6 736 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 WARS2Q9UGM6 360 aaKnown RBP14.92□□□□□ -0.02
LIG1-204ENST00000542460 FBXL3Q9UKT7 428 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.92□□□□□ -0.022e-6■□□□□ 8.3
LIG1-204ENST00000542460 ZNF593O00488 134 aaPredicted RBP14.92□□□□□ -0.02
LIG1-204ENST00000542460 ENTPD6O75354 484 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 IGKV3-15P01624 115 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 HTR1FP30939 366 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 ENTPD1P49961 510 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 SCRN3Q0VDG4 424 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 TMED1Q13445 227 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 MAD2L1BPQ15013 274 aaPredicted RBP14.92□□□□□ -0.02
LIG1-204ENST00000542460 C3orf36Q3SXR2 165 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 TEX30Q5JUR7 227 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 HIST2H2BCQ6DN03 193 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 B3GLCTQ6Y288 498 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 ERI1Q8IV48 349 aaKnown RBP14.92□□□□□ -0.02
LIG1-204ENST00000542460 TIGD4Q8IY51 512 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 OR2AJ1Q8NGZ0 328 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 NOX3Q9HBY0 568 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 HAO2Q9NYQ3 351 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 NPAP1Q9NZP6 1156 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 AASSQ9UDR5 926 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 CYB5R1Q9UHQ9 305 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 LHFPL6Q9Y693 200 aa14.92□□□□□ -0.02
LIG1-204ENST00000542460 ZNF83P51522 516 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 PSG4Q00888 419 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 PLP2Q04941 152 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 GGTLC2Q14390 218 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 DAZAP2Q15038 168 aaPredicted RBP14.91□□□□□ -0.02
LIG1-204ENST00000542460 PCK2Q16822 640 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 ALDH16A1Q8IZ83 802 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 GJC3Q8NFK1 279 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 ZNF75AQ96N20 296 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 ZNF184Q99676 751 aaPredicted RBP14.91□□□□□ -0.02
LIG1-204ENST00000542460 OR2H1Q9GZK4 316 aa14.91□□□□□ -0.02
LIG1-204ENST00000542460 RAB26Q9ULW5 256 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms