RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZNF549Q6P9A3 640 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF613Q6PF04 617 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 WDR74Q6RFH5 385 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SMARCD3Q6STE5 483 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ABHD15Q6UXT9 468 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM91Q6ZNR0 172 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SLC25A26Q70HW3 274 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MRPL21Q7Z2W9 205 aaKnown RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF546Q86UE3 836 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 LRRTM1Q86UE6 522 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 KCNMB4Q86W47 210 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 LRRC56Q8IYG6 542 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 C20orf196Q8IYI0 205 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MYCT1Q8N699 235 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 LINC00482Q8N8I6 264 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 LFNGQ8NES3 379 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 B3GNT7Q8NFL0 401 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MDGA1Q8NFP4 955 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 STEAP2Q8NFT2 490 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR4C5Q8NGB2 326 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR52B6Q8NGF0 335 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR5AN1Q8NGI8 311 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR4D6Q8NGJ1 314 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR13C4Q8NGS5 318 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR5AK2Q8NH90 309 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SUN3Q8TAQ9 357 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 FAM110BQ8TC76 370 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ADAMTS15Q8TE58 950 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 THEM6Q8WUY1 208 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 EEF1AKMT1Q8WVE0 214 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 RNF133Q8WVZ7 376 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 FAM151AQ8WW52 585 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ASB5Q8WWX0 329 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 RAB1CQ92928 201 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM106AQ96A25 262 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SPSB4Q96A44 273 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 COA7Q96BR5 231 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MOB3AQ96BX8 217 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SFRP2Q96HF1 295 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 PGAM5Q96HS1 289 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ITCHQ96J02 903 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 BTF3L4Q96K17 158 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 TEX37Q96LM6 180 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 JSRP1Q96MG2 331 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF583Q96ND8 569 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR7D2Q96RA2 312 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 IMMP2LQ96T52 175 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BLQ99880 126 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SLC6A7Q99884 636 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 KLHDC3Q9BQ90 382 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 C11orf84Q9BUA3 381 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 OR2J1Q9GZK6 312 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 POLR2J2Q9GZM3 115 aaKnown RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 FXYD6Q9H0Q3 95 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 HRH4Q9H3N8 390 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SRMSQ9H3Y6 488 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ST6GALNAC4Q9H4F1 302 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 GSTO2Q9H4Y5 243 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM38AQ9H6F2 299 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 RNF167Q9H6Y7 350 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ASF1BQ9NVP2 202 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MRPS18AQ9NVS2 196 aaKnown RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MS4A12Q9NXJ0 267 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 SIDT1Q9NXL6 827 aaKnown RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 TAS2R8Q9NYW2 309 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 COMMD9Q9P000 198 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MRPL27Q9P0M9 148 aaKnown RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ABRACLQ9P1F3 81 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 LPAR3Q9UBY5 353 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF223Q9UK11 482 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF346Q9UL40 294 aaKnown RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 TNFSF18Q9UNG2 199 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 NEU3Q9UQ49 428 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 ST3GAL6Q9Y274 331 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MRPS18BQ9Y676 258 aaKnown RBP3.93□□□□□ -1.78
SNHG1-219ENST00000542112 PHIPQ8WWQ0 1821 aa3.93□□□□□ -1.78
SNHG1-219ENST00000542112 MICAL3Q7RTP6 2002 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 WDR81Q562E7 1941 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 A0A0G2JNJ9 132 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 A0A1W2PNV4 684 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 A0A1W2PPH5 198 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 FAM230AA0A1W2PPH8 454 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 A0A1W2PR48 441 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TCRBV5S1A1TA0A578 114 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 WDR27A2RRH5 827 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 A6NLC8 198 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRAMEF26H0Y7S4 382 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 J3KR12 359 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 LEFTY2O00292 366 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ACKR2O00590 384 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 AZIN1O14977 448 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRAMEF11O60813 436 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BKO60814 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CTSVO60911 334 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CA11O75493 328 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TNFSF13O75888 250 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 B3GAT3O94766 335 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF432O94892 652 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 NDUFB6O95139 128 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 VAMP5O95183 116 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms