RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 IL20Q9NYY1 176 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 PDP1Q9P0J1 537 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 TIMM10BQ9Y5J6 103 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 PMF1-BGLAPU3KQ54 211 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 C5orf49A4QMS7 147 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 OR6C68A6NDL8 312 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 ARRDC5A6NEK1 342 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 TRIM64A6NGJ6 449 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 TRIM64BA6NI03 449 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 FAM171A2A8MVW0 826 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 B9A039 149 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 H3BN98 237 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 H7C417 338 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 SSX4O60224 188 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 CIB2O75838 187 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 GPANK1O95872 356 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 PRKACGP22612 351 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 CRABP1P29762 137 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 GDI2P50395 445 aaKnown RBP7.96□□□□□ -1.14
SNHG1-215ENST00000540904 NUDT6P53370 316 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.96□□□□□ -1.14
SNHG1-215ENST00000540904 COX10Q12887 443 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 CCNIQ14094 377 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 EFNB3Q15768 340 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 MEP1BQ16820 701 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 CLEC12BQ2HXU8 276 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 SLC36A3Q495N2 470 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 ZNF774Q6NX45 483 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 CD300LDQ6UXZ3 194 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 ASRGL1Q7L266 308 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 ALDH16A1Q8IZ83 802 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 HS3ST5Q8IZT8 346 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 OR6V1Q8N148 313 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 SVOPLQ8N434 492 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 CYB561A3Q8NBI2 242 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 NPEPL1Q8NDH3 523 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 ICA1LQ8NDH6 482 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 C11orf40Q8WZ69 217 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 SNX18Q96RF0 628 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 VRK1Q99986 396 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-215ENST00000540904 SYT3Q9BQG1 590 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 PLK3Q9H4B4 646 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 ZNF556Q9HAH1 456 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 BARX1Q9HBU1 254 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-215ENST00000540904 ASH2LQ9UBL3 628 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 DNAJB9Q9UBS3 223 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 FZR1Q9UM11 496 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 B9D1Q9UPM9 204 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 POLR1DQ9Y2S0 133 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 CMAHPQ9Y471 501 aa7.96□□□□□ -1.14
SNHG1-215ENST00000540904 LOC100509620A0A075B734 347 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 IGLV1-36A0A0B4J1U3 117 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 TMEM129A0AVI4 362 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 EBAG9O00559 213 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 DOK2O60496 412 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 DEAF1O75398 565 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 SNAP29O95721 258 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 HLA-DQA2P01906 255 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 LCKP06239 509 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 POU1F1P28069 291 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 GLRXP35754 106 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 RAD52P43351 418 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 ARHGDIAP52565 204 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 UCP2P55851 309 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 RPS23P62266 143 aaKnown RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 LSM6P62312 80 aaKnown RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 GLO1Q04760 184 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 SCRN3Q0VDG4 424 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 AQP6Q13520 282 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 MSMPQ1L6U9 139 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 SHQ1Q6PI26 577 aaKnown RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 SYT9Q86SS6 491 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 CIARTQ8N365 385 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 LNX2Q8N448 690 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 IQCF1Q8N6M8 205 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 ATG16L2Q8NAA4 619 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 OR2T33Q8NG76 320 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 OR4Q3Q8NH05 313 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 TEX47Q8TBZ9 253 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 UTP4Q969X6 686 aaKnown RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 MRPL24Q96A35 216 aaKnown RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 POM121L2Q96KW2 1035 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 MRPL37Q9BZE1 423 aaKnown RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 RACGAP1Q9H0H5 632 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 NTN4Q9HB63 628 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 EIF3KQ9UBQ5 218 aaKnown RBP7.95□□□□□ -1.14
SNHG1-215ENST00000540904 REV1Q9UBZ9 1251 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 DUSP13Q9UII6 198 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 AP4S1Q9Y587 144 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 FKBP7Q9Y680 259 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 USF3Q68DE3 2245 aa7.95□□□□□ -1.14
SNHG1-215ENST00000540904 H7C1Q1 480 aa7.94□□□□□ -1.14
SNHG1-215ENST00000540904 SMAD7O15105 426 aaKnown RBP7.94□□□□□ -1.14
SNHG1-215ENST00000540904 RER1O15258 196 aa7.94□□□□□ -1.14
SNHG1-215ENST00000540904 SGCEO43556 437 aa7.94□□□□□ -1.14
SNHG1-215ENST00000540904 LY6HO94772 140 aa7.94□□□□□ -1.14
SNHG1-215ENST00000540904 IFNGP01579 166 aa7.94□□□□□ -1.14
SNHG1-215ENST00000540904 TP53P04637 393 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-215ENST00000540904 ADRA2AP08913 450 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms