RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	DENND4C	Q5VZ89	1909 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	REV3L	O60673	3130 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM272	A0A1B0GTI8	110 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TRAPPC13	A5PLN9	417 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PRICKLE3	O43900	615 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DXO	O77932	396 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RCBTB2	O95199	551 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ECD	O95905	644 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SERPINA3	P01011	423 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HIST1H1C	P16403	213 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PRKAR1B	P31321	381 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LUM	P51884	338 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TAS2R20	P59543	309 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NDUFAF6	Q330K2	333 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TRMT12	Q53H54	448 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PLPP5	Q8NEB5	264 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR2AK2	Q8NG84	335 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR4C16	Q8NGL9	310 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZPLD1	Q8TCW7	415 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SEC22A	Q96IW7	307 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SGCZ	Q96LD1	299 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	JSRP1	Q96MG2	331 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MS4A4E	Q96PG1	132 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MICU1	Q9BPX6	476 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ACTRT3	Q9BYD9	372 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF223	Q9UK11	482 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SIGLEC7	Q9Y286	467 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	COL4A3	Q01955	1670 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NCOR2	Q9Y618	2525 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR6C65	A6NJZ3	312 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CCS	O14618	274 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CTDSPL	O15194	276 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CPN1	P15169	458 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF28	P17035	718 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF3	P17036	446 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RPS27	P42677	84 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GUCA1A	P43080	201 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CYB561	P49447	251 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NANOS3	P60323	173 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GPR85	P60893	370 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FLI1	Q01543	452 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MLC1	Q15049	377 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GUCA2B	Q16661	112 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IGSF11	Q5DX21	431 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC35F2	Q8IXU6	374 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CA13	Q8N1Q1	262 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF563	Q8TA94	476 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IFT22	Q9H7X7	185 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PRDM7	Q9NQW5	492 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MED9	Q9NWA0	146 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	KCNE5	Q9UJ90	142 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DKKL1	Q9UK85	242 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC6A5	Q9Y345	797 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IER3IP1	Q9Y5U9	82 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783		V9GY05	133 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LOC100509620	A0A075B734	347 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PRR32	B1ATL7	298 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DISC1	C4P0D8	188 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CTSV	O60911	334 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZFPL1	O95159	310 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR6A2	O95222	327 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	WDPCP	O95876	746 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CSN2	P05814	226 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	KCNJ3	P48549	501 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EFNB2	P52799	333 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TAF13	Q15543	124 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LIN54	Q6MZP7	749 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC48A1	Q6P1K1	146 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM64	Q6YI46	380 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SHISA6	Q6ZSJ9	500 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF546	Q86UE3	836 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RANBP3L	Q86VV4	465 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	C10orf53	Q8N6V4	93 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RELT	Q969Z4	430 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GIMAP5	Q96F15	307 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TSSK2	Q96PF2	358 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NMNAT3	Q96T66	252 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TSNAX	Q99598	290 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CMSS1	Q9BQ75	279 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PTDSS2	Q9BVG9	487 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF471	Q9BX82	626 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM231	Q9H6L2	316 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MTHFD2L	Q9H903	347 aa	Predicted RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM27	Q9HBJ8	222 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EMC3	Q9P0I2	261 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MYEF2	Q9P2K5	600 aa	Known RBP	5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MED31	Q9Y3C7	131 aa		5.12	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ACACB	O00763	2458 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NAP1L6	A6NFF2	107 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OGG1	O15527	345 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GTF2F2	P13984	249 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CD53	P19397	219 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC2A5	P22732	501 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RPL4	P36578	427 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GMFB	P60983	142 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	AKIRIN2	Q53H80	203 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms