RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 VCX3BQ9H321 246 aa6.15□□□□□ -1.42
YBX3-209ENST00000540747 EVA1AQ9H8M9 152 aa6.15□□□□□ -1.42
YBX3-209ENST00000540747 PATZ1Q9HBE1 687 aaKnown RBP6.15□□□□□ -1.42
YBX3-209ENST00000540747 TMEM27Q9HBJ8 222 aa6.15□□□□□ -1.42
YBX3-209ENST00000540747 DECR2Q9NUI1 292 aa6.15□□□□□ -1.42
YBX3-209ENST00000540747 SLAMF8Q9P0V8 285 aa6.15□□□□□ -1.42
YBX3-209ENST00000540747 NPTNQ9Y639 398 aa6.15□□□□□ -1.42
YBX3-209ENST00000540747 SOX21Q9Y651 276 aaPredicted RBP6.15□□□□□ -1.42
YBX3-209ENST00000540747 AUP1Q9Y679 476 aa6.15□□□□□ -1.42
YBX3-209ENST00000540747 IGKV1D-43A0A0B4J1Z2 117 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 LOC100653049A0A140TA62 436 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 IQCMA0A1B0GVH7 501 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 PRORSD1PA6NEY8 169 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 C5orf58C9J3I9 102 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SPRY3O43610 288 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 KRT34O76011 436 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 IGHG1P01857 330 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 IGHV4-38-2P0DP08 117 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 GPX2P18283 190 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 STOMP27105 288 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 CD80P33681 288 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 RBMXP38159 391 aaKnown RBP6.14□□□□□ -1.43
YBX3-209ENST00000540747 UGT2B15P54855 530 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ACTR3P61158 418 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 KLF10Q13118 480 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 BAMBIQ13145 260 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 CDK5R2Q13319 367 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ZMYND11Q15326 602 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ZNF718Q3SXZ3 478 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ARMCX4Q5H9R4 360 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SPATA46Q5T0L3 261 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 THEM4Q5T1C6 240 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ARMC4Q5T2S8 1044 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 NXNQ6DKJ4 435 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ZNF774Q6NX45 483 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 C16orf89Q6UX73 402 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 RBMS3Q6XE24 437 aaKnown RBP6.14□□□□□ -1.43
YBX3-209ENST00000540747 FOXL2NBQ6ZUU3 175 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 LRRC28Q86X40 367 aaPredicted RBP6.14□□□□□ -1.43
YBX3-209ENST00000540747 KRT73Q86Y46 540 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 PTOV1Q86YD1 416 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 POU5F2Q8N7G0 328 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 OR4D11Q8NGI4 311 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 OR6T1Q8NGN1 323 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SLC25A40Q8TBP6 338 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 GEMIN6Q8WXD5 167 aaKnown RBP6.14□□□□□ -1.43
YBX3-209ENST00000540747 ASB10Q8WXI3 467 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SLC25A28Q96A46 364 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 UPRTQ96BW1 309 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ZNF347Q96SE7 839 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 CITED1Q99966 193 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 CCDC28BQ9BUN5 200 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SPATA5L1Q9BVQ7 753 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SLC19A3Q9BZV2 496 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 OR2J1Q9GZK6 312 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 PCDHAC1Q9H158 963 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SIAEQ9HAT2 523 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 SMURF2Q9HAU4 748 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 MEPEQ9NQ76 525 aaPredicted RBP6.14□□□□□ -1.43
YBX3-209ENST00000540747 CYSLTR2Q9NS75 346 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 NDE1Q9NXR1 346 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 PDP1Q9P0J1 537 aaPredicted RBP6.14□□□□□ -1.43
YBX3-209ENST00000540747 VAPAQ9P0L0 249 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 CGGBP1Q9UFW8 167 aaPredicted RBP6.14□□□□□ -1.43
YBX3-209ENST00000540747 ZNF229Q9UJW7 825 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ZDHHC8Q9ULC8 765 aa6.14□□□□□ -1.43
YBX3-209ENST00000540747 ISPDA4D126 451 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 MAGEA13PA6NCF6 341 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 NPIPB13A6NJU9 1138 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 NPIPB4C9JG80 1138 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 M0R3H8 397 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 UBDO15205 165 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 SLC22A2O15244 555 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 TPD52L2O43399 206 aaKnown RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 RNF13O43567 381 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 CH25HO95992 272 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 NGFP01138 241 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 ZNF32P17041 273 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 CD247P20963 164 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 PPIBP23284 216 aaKnown RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 APLNRP35414 380 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 LIPAP38571 399 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 CRYBA2P53672 197 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 PSG4Q00888 419 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 RELBQ01201 579 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 PLP2Q04941 152 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 RPL18Q07020 188 aaKnown RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 SRSF4Q08170 494 aaKnown RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 SCARB2Q14108 478 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 DUSP7Q16829 419 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 PAGE3Q5JUK9 113 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 BLOC1S3Q6QNY0 202 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 Q6ZR03 302 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 RANBP3LQ86VV4 465 aaPredicted RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 RBM45Q8IUH3 476 aaKnown RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 ARMC8Q8IUR7 673 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 C1orf174Q8IYL3 243 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 SPICQ8N5J4 248 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 C10orf53Q8N6V4 93 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 ICA1LQ8NDH6 482 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms