RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ACBD7Q8N6N7 88 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 CNEP1R1Q8N9A8 125 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 ZIC4Q8N9L1 334 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 OR9K2Q8NGE7 335 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 OR52N1Q8NH53 320 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 OR6X1Q8NH79 312 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 RNASE6Q93091 150 aaKnown RBP9.34□□□□□ -0.91
ATL3-204ENST00000540699 TMEM45BQ96B21 275 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 ISOC1Q96CN7 298 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 MGLLQ99685 303 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 NAA50Q9GZZ1 169 aaKnown RBP9.34□□□□□ -0.91
ATL3-204ENST00000540699 ISYNA1Q9NPH2 558 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 NPDC1Q9NQX5 325 aaPredicted RBP9.34□□□□□ -0.91
ATL3-204ENST00000540699 RSL24D1Q9UHA3 163 aaKnown RBP9.34□□□□□ -0.91
ATL3-204ENST00000540699 FOXD3Q9UJU5 478 aaPredicted RBP9.34□□□□□ -0.91
ATL3-204ENST00000540699 HIVEP1P15822 2718 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 PRR14LQ5THK1 2151 aa9.34□□□□□ -0.91
ATL3-204ENST00000540699 HRNRQ86YZ3 2850 aaPredicted RBP9.34□□□□□ -0.92
ATL3-204ENST00000540699 C2CD3Q4AC94 2353 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 IGKV1D-43A0A0B4J1Z2 117 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 FAM171A2A8MVW0 826 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 CENPBD1B2RD01 187 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 SELENOFO60613 162 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 GABARAPO95166 117 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 CNOT4O95628 575 aaKnown RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 SCG5P05408 212 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 OR2T7P0C7T2 308 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 PGA4P0DJD7 388 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 PGA3P0DJD8 388 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ZNF43P17038 809 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 CRABP1P29762 137 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ATP6V1E1P36543 226 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 OR3A2P47893 321 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 TMBIM6P55061 237 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ACTC1P68032 377 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ACTA1P68133 377 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ACSM1Q08AH1 577 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 MLLT11Q13015 90 aaPredicted RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 GALEQ14376 348 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 MED22Q15528 200 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 HIST3H3Q16695 136 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 CNPY1Q3B7I2 92 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ARMCX4Q5H9R4 360 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 OR2G6Q5TZ20 316 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ZNF474Q6S9Z5 364 aaPredicted RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 ZNF322Q6U7Q0 402 aaPredicted RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 TFAP2EQ6VUC0 442 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 CREB3L2Q70SY1 520 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 HDDC2Q7Z4H3 204 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 GPAT4Q86UL3 456 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 LHFPL3Q86UP9 236 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 SLC35F2Q8IXU6 374 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 KLHL36Q8N4N3 616 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 RFLNBQ8N5W9 214 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ZNF610Q8N9Z0 462 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ZNF511Q8NB15 262 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 NOXO1Q8NFA2 376 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 OR10H4Q8NGA5 316 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 OR6K6Q8NGW6 343 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 OR2T27Q8NH04 317 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ADAD1Q96M93 576 aaKnown RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 EMC6Q9BV81 110 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ALG8Q9BVK2 526 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 OPN3Q9H1Y3 402 aaPredicted RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 SRA1Q9HD15 236 aaKnown RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 CHCHD3Q9NX63 227 aaKnown RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 ENPP5Q9UJA9 477 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 PROCRQ9UNN8 238 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 COPS3Q9UNS2 423 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 CAB39Q9Y376 341 aaPredicted RBP9.33□□□□□ -0.92
ATL3-204ENST00000540699 ABCA4P78363 2273 aa9.33□□□□□ -0.92
ATL3-204ENST00000540699 ZFHX3Q15911 3703 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 A0A1W2PQL4 384 aaPredicted RBP9.32□□□□□ -0.92
ATL3-204ENST00000540699 SLC35F4A4IF30 521 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 EEF1E1-BLOC1S5C9J1V9 151 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 H3BMQ9 156 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 C19orf84I3L1E1 186 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 EEF1E1O43324 174 aaKnown RBP9.32□□□□□ -0.92
ATL3-204ENST00000540699 SLC16A7O60669 478 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 ZNF432O94892 652 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 LALBAP00709 142 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 IGHG1P01857 330 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 GAAP10253 952 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 PSKH1P11801 424 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 NAA10P41227 235 aaPredicted RBP9.32□□□□□ -0.92
ATL3-204ENST00000540699 CENPAP49450 140 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 RGS6P49758 472 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 ZNF133P52736 654 aaPredicted RBP9.32□□□□□ -0.92
ATL3-204ENST00000540699 BLVRAP53004 296 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 SORDQ00796 357 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 FMODQ06828 376 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 C1DQ13901 141 aaKnown RBP9.32□□□□□ -0.92
ATL3-204ENST00000540699 ETFDHQ16134 617 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 SSX1Q16384 188 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 SLC25A47Q6Q0C1 308 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 SSX6Q7RTT6 188 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 SLC16A9Q7RTY1 509 aa9.32□□□□□ -0.92
ATL3-204ENST00000540699 CDC20BQ86Y33 519 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms