RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 IFNL4K9M1U5 179 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 IMPA2O14732 288 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 PPIHO43447 177 aaKnown RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 IDH3BO43837 385 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 SNX3O60493 162 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 KHDRBS3O75525 346 aaKnown RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 KRT36O76013 467 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 LY6HO94772 140 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 SLC2A10O95528 541 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 MMP7P09237 267 aaPredicted RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 PATE4P0C8F1 98 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 FAM157BP0CG42 384 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF32P17041 273 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 HOXB6P17509 224 aaKnown RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 ALDH3B1P43353 468 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 LSM6P62312 80 aaKnown RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 MXRA7P84157 204 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 SF3A3Q12874 501 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 AQP6Q13520 282 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 FAM120AOSQ5T036 256 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 MBNL2Q5VZF2 373 aaKnown RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 RPL13AP3Q6NVV1 102 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 SLC25A47Q6Q0C1 308 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 DPY19L2P2Q6ZN68 376 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 FOXL2NBQ6ZUU3 175 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 GLB1L2Q8IW92 636 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 PGAM4Q8N0Y7 254 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 ARHGAP24Q8N264 748 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 OR51F2Q8NH61 342 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 NSMCE2Q96MF7 247 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 DCLRE1CQ96SD1 692 aaKnown RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 GPX7Q96SL4 187 aaPredicted RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 OR2H1Q9GZK4 316 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 FAM107BQ9H098 131 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 MYLK2Q9H1R3 596 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 TPK1Q9H3S4 243 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 SAP30LQ9HAJ7 183 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 MAN2C1Q9NTJ4 1040 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 TBCCD1Q9NVR7 557 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 TMEFF2Q9UIK5 374 aaPredicted RBP8.91□□□□□ -0.98
CDCA3-208ENST00000540683 MXRA5Q9NR99 2828 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.98
CDCA3-208ENST00000540683 IGHV1-69-2A0A0G2JMI3 117 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 TEX13CA0A0J9YWL9 993 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 RNF212BA8MTL3 300 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 CLDN25C9JDP6 229 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 PIP5K1CO60331 668 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 GADD45GO95257 159 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 ABHD16AO95870 558 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 RENP00797 406 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 TNFRSF1AP19438 455 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 GATA3P23771 443 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 CPT2P23786 658 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 LAP3P28838 519 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 NOS3P29474 1203 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SLC6A6P31641 620 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SRP14P37108 136 aaKnown RBP8.9□□□□□ -0.98
CDCA3-208ENST00000540683 CRYBB2P43320 205 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 YAP1P46937 504 aaKnown RBP8.9□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF81P51508 661 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 ERVK-25P63136 954 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 PSG4Q00888 419 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 RUNX1T1Q06455 604 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 KRR1Q13601 381 aaKnown RBP8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SLC36A3Q495N2 470 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SLC27A4Q6P1M0 643 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SHQ1Q6PI26 577 aaKnown RBP8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SMARCD3Q6STE5 483 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 JAZF1Q86VZ6 243 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SLC7A13Q8TCU3 470 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 NABP1Q96AH0 204 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 NMD3Q96D46 503 aaKnown RBP8.9□□□□□ -0.98
CDCA3-208ENST00000540683 C1orf159Q96HA4 380 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 PYURFQ96I23 114 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 POM121L2Q96KW2 1035 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 C4orf45Q96LM5 186 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 TSPAN32Q96QS1 320 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 SNX18Q96RF0 628 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 MUC13Q9H3R2 512 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 POLE4Q9NR33 117 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 NDUFAF4Q9P032 175 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 RHCGQ9UBD6 479 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 TAGLN3Q9UI15 199 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 ADAM21Q9UKJ8 722 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 POLR1DQ9Y2S0 133 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 NOP16Q9Y3C1 178 aaKnown RBP8.9□□□□□ -0.98
CDCA3-208ENST00000540683 UGT2A1Q9Y4X1 527 aa8.9□□□□□ -0.98
CDCA3-208ENST00000540683 COL6A5A8TX70 2615 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 A0A0A6YYJ9 748 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 TRAV20A0A0B4J274 112 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 OR6C6A6NF89 314 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 UNC119BA6NIH7 251 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 KIAA1324LA8MWY0 1029 aaPredicted RBP8.89□□□□□ -0.99
CDCA3-208ENST00000540683 J3KTA2 159 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 FFAR1O14842 300 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 SGCEO43556 437 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 LILRA1O75019 489 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 FABP3P05413 133 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 ADH4P08319 380 aa8.89□□□□□ -0.99
CDCA3-208ENST00000540683 NAT2P11245 290 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms