RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 KIF26BQ2KJY2 2108 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 MPZL1O95297 269 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 CNR1P21554 472 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 AVPR2P30518 371 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 GLT8D1Q68CQ7 371 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 TMEM225Q6GV28 225 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 CORO6Q6QEF8 472 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 MARCH3Q86UD3 253 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 MCATQ8IVS2 390 aaKnown RBP18.27■□□□□ 0.52
TMEM260-203ENST00000539559 OR1S2Q8NGQ3 325 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 OR13C8Q8NGS7 320 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 C8orf33Q9H7E9 229 aaPredicted RBP18.27■□□□□ 0.52
TMEM260-203ENST00000539559 VSIG4Q9Y279 399 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 CDC14CA4D256 554 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 RNF222A6NCQ9 220 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 TMEM127O75204 238 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 SNAPC5O75971 98 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 ZNF735P0CB33 412 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 DLSTP36957 453 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 UBE2IP63279 158 aaKnown RBP18.26■□□□□ 0.51
TMEM260-203ENST00000539559 MRPS21P82921 87 aaKnown RBP18.26■□□□□ 0.51
TMEM260-203ENST00000539559 EGR3Q06889 387 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 SKP2Q13309 424 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 SLC17A1Q14916 467 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 MOB3CQ70IA8 216 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 RTN4RL2Q86UN3 420 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 LINC00518Q8N0U6 118 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 JAGN1Q8N5M9 183 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 FAM160A2Q8N612 972 aaPredicted RBP18.26■□□□□ 0.51
TMEM260-203ENST00000539559 OR5M8Q8NGP6 311 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 CCDC107Q8WV48 283 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 ZNF432O94892 652 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 ACTBP60709 375 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 ACTG1P63261 375 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 OR52W1Q6IF63 320 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 GVQW1Q8N7I0 195 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 ZSCAN1Q8NBB4 408 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 CASTOR1Q8WTX7 329 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 OR8B4Q96RC9 309 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 POTEKPQ9BYX7 375 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 SLC19A3Q9BZV2 496 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 ASF1BQ9NVP2 202 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 EPHA6Q9UF33 1036 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 TNFSF18Q9UNG2 199 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 DHDHQ9UQ10 334 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 MTCH2Q9Y6C9 303 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 ZNF736B4DX44 427 aaPredicted RBP18.26■□□□□ 0.51
TMEM260-203ENST00000539559 F12P00748 615 aaPredicted RBP18.26■□□□□ 0.51
TMEM260-203ENST00000539559 HTR2CP28335 458 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 OR7A5Q15622 319 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 C11orf87Q6NUJ2 197 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 KCNRGQ8N5I3 272 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 SLC41A2Q96JW4 573 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 NRSN2Q9GZP1 204 aa18.26■□□□□ 0.51
TMEM260-203ENST00000539559 TMEM184BQ9Y519 407 aaPredicted RBP18.26■□□□□ 0.51
TMEM260-203ENST00000539559 SEC16AO15027 2179 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 SLC16A7O60669 478 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 WDPCPO95876 746 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 CYB5AP00167 134 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 RNH1P13489 461 aaKnown RBP18.25■□□□□ 0.51
TMEM260-203ENST00000539559 RAB3AP20336 220 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 MAOBP27338 520 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 RPL35P42766 123 aaKnown RBP18.25■□□□□ 0.51
TMEM260-203ENST00000539559 STK11Q15831 433 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 GUCA2BQ16661 112 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 FAM166AQ6J272 317 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 FAM219AQ8IW50 185 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 ASB5Q8WWX0 329 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 ADOQ96SZ5 270 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 MRPL22Q9NWU5 206 aaKnown RBP18.25■□□□□ 0.51
TMEM260-203ENST00000539559 SLC39A1Q9NY26 324 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 PCDHB10Q9UN67 800 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 TMED7Q9Y3B3 224 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 PNMTP11086 282 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 AKR1D1P51857 326 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 PPIAP62937 165 aaKnown RBP18.25■□□□□ 0.51
TMEM260-203ENST00000539559 SKP1P63208 163 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 PMPCAQ10713 525 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 ASB12Q8WXK4 309 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 ZBTB8AQ96BR9 441 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 SLC25A44Q96H78 314 aaPredicted RBP18.25■□□□□ 0.51
TMEM260-203ENST00000539559 CYYR1Q96J86 154 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 MRGPRX1Q96LB2 322 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 COMMD9Q9P000 198 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 UPB1Q9UBR1 384 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 GPN3Q9UHW5 284 aaPredicted RBP18.25■□□□□ 0.51
TMEM260-203ENST00000539559 CD207Q9UJ71 328 aa18.25■□□□□ 0.51
TMEM260-203ENST00000539559 A0A0D9SG52 128 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 LOC101059948A0A1B0GTJ6 334 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 GP1BAP07359 652 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 DCNP07585 359 aaKnown RBP18.24■□□□□ 0.51
TMEM260-203ENST00000539559 BDKRB2P30411 391 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 RIPPLY1Q0D2K3 151 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 PPP1R1AQ13522 171 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 Q6ZSR6 202 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 KCTD9Q7L273 389 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 KDM8Q8N371 416 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 ZNF615Q8N8J6 731 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 FAM46BQ96A09 425 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 CST11Q9H112 138 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms