RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 MXD1Q05195 221 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 KHDRBS2Q5VWX1 349 aaKnown RBP4.03□□□□□ -1.76
TRAV11-201ENST00000539512 FBXW9Q5XUX1 488 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 ABHD12BQ7Z5M8 362 aaPredicted RBP4.03□□□□□ -1.76
TRAV11-201ENST00000539512 TMEM150AQ86TG1 271 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 IQCKQ8N0W5 287 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 OR2A1Q8NGT9 310 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 MCUR1Q96AQ8 359 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 ZNF382Q96SR6 550 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 ZNF160Q9HCG1 818 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 LGALS13Q9UHV8 139 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 PSG8Q9UQ74 426 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 TRBV11-1A0A0K0K1C0 115 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 TCP11X1B4DZS4 312 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 SPECC1L-ADORA2AF8WAN1 911 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 BET1O15155 118 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 CDC40O60508 579 aaKnown RBP eCLIP4.02□□□□□ -1.77
TRAV11-201ENST00000539512 FKBP6O75344 327 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 H6PDO95479 791 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 TSPAN13O95857 204 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 MRPL3P09001 348 aaKnown RBP4.02□□□□□ -1.77
TRAV11-201ENST00000539512 IGHV1-8P0DP01 117 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 CEACAM3P40198 252 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 CX3CR1P49238 355 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 EIF3EP60228 445 aaKnown RBP4.02□□□□□ -1.77
TRAV11-201ENST00000539512 STXBP1P61764 594 aaKnown RBP4.02□□□□□ -1.77
TRAV11-201ENST00000539512 SLC25A11Q02978 314 aaKnown RBP4.02□□□□□ -1.77
TRAV11-201ENST00000539512 EIF4EBP1Q13541 118 aaPredicted RBP4.02□□□□□ -1.77
TRAV11-201ENST00000539512 QPRTQ15274 297 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 FAM78AQ5JUQ0 283 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 LY6G6FQ5SQ64 297 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 SPECC1LQ69YQ0 1117 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 C22orf42Q6IC83 251 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 REEP3Q6NUK4 255 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 TTC23LQ6PF05 361 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 BBS5Q8N3I7 341 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 OR4C5Q8NGB2 326 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 OR10J6PQ8NGY7 276 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 UBALD1Q8TB05 177 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 ACMSDQ8TDX5 336 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 FRZBQ92765 325 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 CHAC1Q9BUX1 264 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 RACGAP1Q9H0H5 632 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 OR51M1Q9H341 326 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 SYNDIG1Q9H7V2 258 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 NEK6Q9HC98 313 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 GPATCH2LQ9NWQ4 482 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 KCNE3Q9Y6H6 103 aa4.02□□□□□ -1.77
TRAV11-201ENST00000539512 WDR62O43379 1518 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 MRC2Q9UBG0 1479 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 IGHV5-10-1A0A0J9YXX1 117 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 NUPL2O15504 423 aaKnown RBP4.01□□□□□ -1.77
TRAV11-201ENST00000539512 RDH16O75452 317 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 WISP3O95389 354 aaPredicted RBP4.01□□□□□ -1.77
TRAV11-201ENST00000539512 RHOXF2BP0C7M4 288 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 PABPC4LP0CB38 370 aaKnown RBP4.01□□□□□ -1.77
TRAV11-201ENST00000539512 UBTFL6P0CB48 400 aaPredicted RBP4.01□□□□□ -1.77
TRAV11-201ENST00000539512 OR5H8P0DN80 308 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 SYKP43405 635 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 C21orf59P57076 290 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 IRF4Q15306 451 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 OR7A5Q15622 319 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 DUX4L9Q6RFH8 374 aaPredicted RBP4.01□□□□□ -1.77
TRAV11-201ENST00000539512 Q6ZSR3 168 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 GTPBP8Q8N3Z3 284 aaPredicted RBP4.01□□□□□ -1.77
TRAV11-201ENST00000539512 PRELID2Q8N945 189 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 NOXO1Q8NFA2 376 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 ECHDC3Q96DC8 303 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 SEH1LQ96EE3 360 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 CHP1Q99653 195 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 ZNRD1Q9P1U0 126 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 ST3GAL6Q9Y274 331 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 YTHDF2Q9Y5A9 579 aaKnown RBP4.01□□□□□ -1.77
TRAV11-201ENST00000539512 TMEM14AQ9Y6G1 99 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 NINLQ9Y2I6 1382 aa4.01□□□□□ -1.77
TRAV11-201ENST00000539512 IGLV1-50A0A075B6I6 118 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 A0A075B6Q4 140 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 OR6C74A6NCV1 312 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 NDUFAB1O14561 156 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 CISD3P0C7P0 127 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 TCN2P20062 427 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 NPY1RP25929 384 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 GTF2E2P29084 291 aaKnown RBP4□□□□□ -1.77
TRAV11-201ENST00000539512 OTX1P32242 354 aaPredicted RBP4□□□□□ -1.77
TRAV11-201ENST00000539512 UBE2NP61088 152 aaKnown RBP4□□□□□ -1.77
TRAV11-201ENST00000539512 PSMD5Q16401 504 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 SPANXN2Q5MJ10 180 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 METTL21CQ5VZV1 264 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 MBOAT1Q6ZNC8 495 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 CMC1Q7Z7K0 106 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 CALHM1Q8IU99 346 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 RIMKLAQ8IXN7 391 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 ZNF430Q9H8G1 570 aaPredicted RBP4□□□□□ -1.77
TRAV11-201ENST00000539512 RAB20Q9NX57 234 aa4□□□□□ -1.77
TRAV11-201ENST00000539512 CCDC59Q9P031 241 aaKnown RBP4□□□□□ -1.77
TRAV11-201ENST00000539512 RLFQ13129 1914 aa3.99□□□□□ -1.77
TRAV11-201ENST00000539512 NCAPD3P42695 1498 aa3.99□□□□□ -1.77
TRAV11-201ENST00000539512 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
TRAV11-201ENST00000539512 RAD51BO15315 384 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms