RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 PITX2Q99697 317 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 EMC6Q9BV81 110 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 FAIMQ9NVQ4 179 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 PARPBPQ9NWS1 579 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 H2AFY2Q9P0M6 372 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 B3GAT1Q9P2W7 334 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 FLVCR1Q9Y5Y0 555 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 HEATR1Q9H583 2144 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 A0A0G2JK05 382 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 NPIPB13A6NJU9 1138 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF716A6NP11 495 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 NPIPB4C9JG80 1138 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 PRR23D1E9PI22 279 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 SURF4O15260 269 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 SLC43A1O75387 559 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 VENTXO95231 258 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 CLIC3O95833 236 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 YES1P07947 543 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 PRR23D2P0DMB1 279 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 ACADSP16219 412 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 HIST1H1CP16403 213 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 TTKP33981 857 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 RPS7P62081 194 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 ADARB1P78563 741 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 MED21Q13503 144 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 CAMK2DQ13557 499 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 C12orf73Q69YU5 71 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 ADCK1Q86TW2 530 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 TUSC5Q8IXB3 177 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF100Q8IYN0 542 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 OR8J1Q8NGP2 316 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 RBP7Q96R05 134 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 IL4I1Q96RQ9 567 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 RERGLQ9H628 205 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 GP6Q9HCN6 339 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 CMC2Q9NRP2 79 aa10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 NDRG4Q9ULP0 352 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-208ENST00000538933 IGKV3D-15A0A087WSY6 115 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 SNTNA6NMZ2 147 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF724A8MTY0 619 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 E7EQL1 145 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 H7C1C5 153 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 H7C417 338 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 TXNDC12O95881 172 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 AGTR1P30556 359 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 CENPAP49450 140 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 LCN6P62502 163 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 P2RY6Q15077 328 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 RAB35Q15286 201 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 CR1LQ2VPA4 569 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF691Q5VV52 312 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 DNM1P34Q6PK57 102 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 THAP5Q7Z6K1 395 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 UBE2J2Q8N2K1 259 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 GPR137CQ8N3F9 429 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 SYT14Q8NB59 555 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 SLC37A3Q8NCC5 494 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 NOXO1Q8NFA2 376 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 OR6X1Q8NH79 312 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 FNDC8Q8TC99 324 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 ZFAND2BQ8WV99 257 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 TRUB1Q8WWH5 349 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 APH1AQ96BI3 265 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 SLC25A44Q96H78 314 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 Q96MT0 163 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 MUS81Q96NY9 551 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF385AQ96PM9 386 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 NMNAT3Q96T66 252 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 SOX7Q9BT81 388 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 C12orf49Q9H741 205 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 BCO1Q9HAY6 547 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 CBLN4Q9NTU7 201 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 CLN6Q9NWW5 311 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 ASB6Q9NWX5 421 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 UPB1Q9UBR1 384 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 RCE1Q9Y256 329 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 HSPE1-MOB4S4R3N1 261 aa10.86□□□□□ -0.67
CLSTN3-208ENST00000538933 PRSS37A4D1T9 235 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 OR6C65A6NJZ3 312 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 M0R129 80 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 PRKYO43930 277 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 TRMUO75648 421 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 LY6HO94772 140 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 SLC2A10O95528 541 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 SELENOPP49908 381 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 CDH11P55287 796 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 LGALS3BPQ08380 585 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 CRMP1Q14194 572 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 KLHL12Q53G59 568 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 MESTQ5EB52 335 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 PRR31Q5SQ13 230 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 ARMC4Q5T2S8 1044 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 PLBD1Q6P4A8 553 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 TFAP2EQ6VUC0 442 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 C3orf56Q8N813 242 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 CYB561A3Q8NBI2 242 aa10.85□□□□□ -0.67
CLSTN3-208ENST00000538933 SEMA6DQ8NFY4 1073 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms