RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SLC17A5Q9NRA2 495 aa8.29□□□□□ -1.08
DDB1-211ENST00000538280 HRH3Q9Y5N1 445 aa8.29□□□□□ -1.08
DDB1-211ENST00000538280 MEIKINA0A087WXM9 373 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 CIB4A0PJX0 185 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ACOT7O00154 380 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 SLC17A2O00624 439 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 GMFGO60234 142 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 GMDSO60547 372 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 SLC16A7O60669 478 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 OR6A2O95222 327 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 TGM6O95932 706 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 WNT11O96014 354 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 PNPP00491 289 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 HEXBP07686 556 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 SYPP08247 313 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ATXN8OSP0DMR3 200 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 IGFBP3P17936 291 aaPredicted RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 IL11P20809 199 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 CDK2P24941 298 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 MSX1P28360 303 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 CCR6P51684 374 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 CLDN12P56749 244 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 FBXW4P57775 412 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 CCL7P80098 99 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 MFGE8Q08431 387 aaPredicted RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 PUDPQ08623 228 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 MELKQ14680 651 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ETFDHQ16134 617 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ZNF239Q16600 458 aaKnown RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 RNASE12Q5GAN4 147 aaKnown RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 TMEM255AQ5JRV8 349 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 GUSBP11Q6P575 273 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 KCTD18Q6PI47 426 aaPredicted RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 PAPD4Q6PIY7 484 aaKnown RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 POMZP3Q6PJE2 187 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 DNM1P34Q6PK57 102 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 DEGS2Q6QHC5 323 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 C16orf47Q6ZP98 133 aaPredicted RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 SHISA6Q6ZSJ9 500 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 TMPRSS7Q7RTY8 843 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 TMPRSS12Q86WS5 348 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ZNF227Q86WZ6 799 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ADPRHL1Q8NDY3 354 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 SLC26A10Q8NG04 563 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 OR11G2Q8NGC1 345 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 OR51A4Q8NGJ6 313 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 SAP25Q8TEE9 199 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 FCAMRQ8WWV6 532 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 TMEM106AQ96A25 262 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 GPR137Q96N19 417 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 SPSB2Q99619 263 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 SMAD5Q99717 465 aaKnown RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 ABHD6Q9BV23 337 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 C20orf85Q9H1P6 137 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 GAREM1Q9H706 876 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 CHST11Q9NPF2 352 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ALKBH4Q9NXW9 302 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 PISDQ9UG56 409 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ING1Q9UK53 422 aaPredicted RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 RARRES3Q9UL19 164 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 ATXN7L1Q9ULK2 861 aaPredicted RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 RCE1Q9Y256 329 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 MRPS7Q9Y2R9 242 aaKnown RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 URB1O60287 2271 aaKnown RBP8.28□□□□□ -1.08
DDB1-211ENST00000538280 ATMQ13315 3056 aa8.28□□□□□ -1.08
DDB1-211ENST00000538280 IGHV5-10-1A0A0J9YXX1 117 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 A0A1B0GUH1 482 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 A0A1B0GVI7 797 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 A6NL46 340 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 ANXA2P2A6NMY6 339 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 SMLR1H3BR10 107 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 AGRPO00253 132 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 XRCC3O43542 346 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 PEX14O75381 377 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 SCRG1O75711 98 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 AQP8O94778 261 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 HRGP04196 525 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 IL5P05113 134 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 ISG15P05161 165 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 ANXA2P07355 339 aaKnown RBP8.27□□□□□ -1.09
DDB1-211ENST00000538280 SPARCP09486 303 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 FBXO45P0C2W1 286 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 ANXA3P12429 323 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 HLA-DOBP13765 273 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 PSMB1P20618 241 aaKnown RBP8.27□□□□□ -1.09
DDB1-211ENST00000538280 ACHEP22303 614 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 DAP3P51398 398 aaKnown RBP8.27□□□□□ -1.09
DDB1-211ENST00000538280 RIDAP52758 137 aaKnown RBP8.27□□□□□ -1.09
DDB1-211ENST00000538280 EMP2P54851 167 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 FOXL2P58012 376 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 DCDP81605 110 aaKnown RBP8.27□□□□□ -1.09
DDB1-211ENST00000538280 GALK2Q01415 458 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 FOXF1Q12946 379 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 PLA2G7Q13093 441 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 IKZF1Q13422 519 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 CLPPQ16740 277 aaPredicted RBP8.27□□□□□ -1.09
DDB1-211ENST00000538280 HLA-BQ31612 363 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 BTBD16Q32M84 506 aa8.27□□□□□ -1.09
DDB1-211ENST00000538280 PLPPR5Q32ZL2 321 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms