RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 PIK3R3Q92569 461 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NR4A3Q92570 626 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 DAZLQ92904 295 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RPL36ALQ969Q0 106 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TMBIM1Q969X1 311 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SLC25A28Q96A46 364 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ORAI1Q96D31 301 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CCDC126Q96EE4 140 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF354BQ96LW1 612 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SECISBP2Q96T21 854 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 WFDC6Q9BQY6 131 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 UTP23Q9BRU9 249 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 BTBD10Q9BSF8 475 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PRSS22Q9GZN4 317 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ROGDIQ9GZN7 287 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ILKAPQ9H0C8 392 aaPredicted RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 DEFB127Q9H1M4 99 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 IKZF5Q9H5V7 419 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF385DQ9H6B1 395 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 REEP4Q9H6H4 257 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PPP1R3EQ9H7J1 279 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZDHHC11Q9H8X9 412 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 VIPAS39Q9H9C1 493 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FOLH1BQ9HBA9 442 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NEK6Q9HC98 313 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MOV10Q9HCE1 1003 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 YAE1D1Q9NRH1 226 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TMEM45AQ9NWC5 275 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MRPL22Q9NWU5 206 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LYARQ9NX58 379 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MS4A12Q9NXJ0 267 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ELOVL5Q9NYP7 299 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SLC25A37Q9NYZ2 338 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 AHSPQ9NZD4 102 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SENP1Q9P0U3 644 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SPRR3Q9UBC9 169 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SEC14L3Q9UDX4 400 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 C19orf25Q9UFG5 118 aaPredicted RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PHF11Q9UIL8 331 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TINAGQ9UJW2 476 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FBXL2Q9UKC9 423 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NPIPA1Q9UND3 350 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RPH3ALQ9UNE2 315 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LAMP3Q9UQV4 416 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MRPS33Q9Y291 106 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF835Q9Y2P0 537 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 YARS2Q9Y2Z4 477 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NOSIPQ9Y314 301 aaKnown RBP2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 GMEB1Q9Y692 573 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ARID1AO14497 2285 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ATRQ13535 2644 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NUP210LQ5VU65 1888 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ABCA2Q9BZC7 2435 aa2.26□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ANKRD17O75179 2603 aaKnown RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 A0A0A0MQY5 61 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NPIPA5A0A0B4J1W7 369 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LOC100506127A0A0U1RQW1 187 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 A0A1B0GTH9 108 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SERTM2A0A1B0GWG4 89 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ACOD1A6NK06 481 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CLDN24A6NM45 220 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TMEM114B3SHH9 223 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 HSBP1L1C9JCN9 74 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NPIPA7E9PJI5 369 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NPIPB9F8W1W9 429 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 H3BNX3 289 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SCAMP2O15127 329 aaKnown RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ARPC1BO15143 372 aaKnown RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 HDAC3O15379 428 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CFLARO15519 480 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RGS14O43566 566 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 GPRIN2O60269 458 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 GPR137BO60478 399 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CIDEAO60543 219 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZG16O60844 167 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ICOSLGO75144 302 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 GCM2O75603 506 aaPredicted RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 KCNK2O95069 426 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SYNGR4O95473 234 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NTN1O95631 604 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PAHP00439 452 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SERPINA3P01011 423 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 IGHG3P01860 377 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 APOA1P02647 267 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 OPN1LWP04000 364 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 HMGN2P05204 90 aaKnown RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 H1F0P07305 194 aaKnown RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NPIPA8P0DM63 369 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FCGR1AP12314 374 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PRKACAP17612 351 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LBPP18428 481 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FUT1P19526 365 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 KLK2P20151 261 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 EDN2P20800 178 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF10P21506 573 aaPredicted RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PRKACBP22694 351 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SHC1P29353 583 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FCGR2BP31994 310 aaPredicted RBP2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 GABRA3P34903 492 aa2.25□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SERPINB5P36952 375 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms