RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MAGT1Q9H0U3 335 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 OR51B6Q9H340 312 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 ELOVL2Q9NXB9 296 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 IGKV6D-41A0A0C4DH26 115 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 GLTPD2A6NH11 291 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 GFRA2O00451 464 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 CLEC3BP05452 202 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 CRYBA1P05813 215 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SULT1A3P0DMM9 295 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SULT1A4P0DMN0 295 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ACOT6Q3I5F7 207 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ENTPD8Q5MY95 495 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF600Q6ZNG1 722 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SLC16A12Q6ZSM3 486 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF687Q8N1G0 1237 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 BVESQ8NE79 360 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 OR5D18Q8NGL1 313 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TRAPPC4Q9Y296 219 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 WNT10BO00744 389 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 UGDHO60701 494 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 DAOP14920 347 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TSPAN31Q12999 210 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 THNSL2Q86YJ6 484 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 WDTC1Q8N5D0 677 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 NANOGP1Q8N7R0 232 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 IGSF8Q969P0 613 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 THOC3Q96J01 351 aaKnown RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PARD6GQ9BYG4 376 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 EVA1AQ9H8M9 152 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 FAM74A7A6NL05 159 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 H7C1C5 153 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 MMP11P24347 488 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ACKR3P25106 362 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ACTR1AP61163 376 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 IKZF1Q13422 519 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 OR8G1Q15617 311 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 FAM74A3Q4VXF1 159 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM65Q6PI78 240 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 BAP18Q8IXM2 172 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 NRSN1Q8IZ57 195 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 RTP3Q9BQQ7 232 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 C1QTNF6Q9BXI9 259 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 RBM38Q9H0Z9 239 aaKnown RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 YTHDF2Q9Y5A9 579 aaKnown RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PCDHGA9Q9Y5G4 932 aaKnown RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 NCMAPQ5T1S8 102 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 LCTLQ6UWM7 567 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF566Q969W8 418 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TIMM29Q9BSF4 260 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 MED17Q9NVC6 651 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 HIST1H3AP68431 136 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TXNDC8Q6A555 127 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TRILQ7L0X0 811 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 OR51A2Q8NGJ7 313 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM106AQ96A25 262 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SHISA4Q96DD7 197 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 VN1R3Q9BXE9 311 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PLXNB2O15031 1838 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TRBV23-1A0A0A0MS06 115 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SERTM2A0A1B0GWG4 89 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 KIAA1324LA8MWY0 1029 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 RPA2P15927 270 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 GALR1P47211 349 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF140P52738 457 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PDE7AQ13946 482 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 CLEC14AQ86T13 490 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 VRK2Q86Y07 508 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 KDF1Q8NAX2 398 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 OR52D1Q9H346 318 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SNED1Q8TER0 1413 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TUSC2O75896 110 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 MPC1LP0DKB6 136 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PLGLB1Q02325 96 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PJVKQ0ZLH3 352 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 DHRS13Q6UX07 377 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 CCDC190Q86UF4 302 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 NUDCD2Q8WVJ2 157 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 DDA1Q9BW61 102 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 B4GALT6Q9UBX8 382 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PADI3Q9ULW8 664 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 C17orf112F2Z3M2 114 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 CHRM4P08173 479 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF573Q86YE8 665 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 CNTN4Q8IWV2 1026 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 WFIKKN2Q8TEU8 576 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 PACRGQ96M98 296 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 GABARAPL1Q9H0R8 117 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 LCTP09848 1927 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 OR4E1P0C645 316 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 RPL12P30050 165 aaKnown RBP5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TEAD2Q15562 447 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 SYPL1Q16563 259 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM99Q8N816 258 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF485Q8NCK3 441 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 FBXO22Q8NEZ5 403 aa5.22□□□□□ -1.57
CSMD1-215ENST00000537824 OR4N2Q8NGD1 307 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms