RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 M0R036 132 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 PMP2P02689 132 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 GYPBP06028 91 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 TMIGD3P0DMS9 266 aaPredicted RBP12.66□□□□□ -0.38
LIG1-203ENST00000536218 CASRP41180 1078 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 ATP1B3P54709 279 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 NRG3P56975 720 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 C11orf87Q6NUJ2 197 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 REC114Q7Z4M0 266 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 NECAB3Q96P71 396 aaPredicted RBP12.66□□□□□ -0.38
LIG1-203ENST00000536218 CCDC86Q9H6F5 360 aaKnown RBP12.66□□□□□ -0.38
LIG1-203ENST00000536218 CALML5Q9NZT1 146 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 A0A0B4J2A0 478 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 RNF222A6NCQ9 220 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 PEX12O00623 359 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 OR10H2O60403 315 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 CCR5P51681 352 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 MPPED2Q15777 294 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 STPG1Q5TH74 334 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 DGAT2L6Q6ZPD8 337 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 ACOT7LQ6ZUV0 252 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 MEPCEQ7L2J0 689 aaKnown RBP12.65□□□□□ -0.38
LIG1-203ENST00000536218 MRGPREQ86SM8 312 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 OR2L13Q8N349 312 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 COX18Q8N8Q8 333 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 PPP1R1CQ8WVI7 109 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 SDF2Q99470 211 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 ACKR4Q9NPB9 350 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 SHPKQ9UHJ6 478 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 FOXJ3Q9UPW0 622 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
LIG1-203ENST00000536218 C9orf170A2RU37 121 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 PPIHO43447 177 aaKnown RBP12.65□□□□□ -0.38
LIG1-203ENST00000536218 GPR75O95800 540 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 FUT1P19526 365 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 CD80P33681 288 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 GABRA3P34903 492 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 TAS2R20P59543 309 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 PJVKQ0ZLH3 352 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 TDGQ13569 410 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 PDZD11Q5EBL8 140 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 ZNF813Q6ZN06 617 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 ARL6IP6Q8N6S5 226 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 PHF7Q9BWX1 381 aaPredicted RBP12.65□□□□□ -0.38
LIG1-203ENST00000536218 MTHFD2LQ9H903 347 aaPredicted RBP12.65□□□□□ -0.38
LIG1-203ENST00000536218 APMAPQ9HDC9 416 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 ASXL3Q9C0F0 2248 aa12.65□□□□□ -0.38
LIG1-203ENST00000536218 TRAV1-2A0A0B4J238 106 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 SULT2B1O00204 365 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 CYR61O00622 381 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 CLUP10909 449 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 SRFP11831 508 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 RAB5AP20339 215 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 NME2P22392 152 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 BLKP51451 505 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 NNATQ16517 81 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 NIPAL3Q6P499 406 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 SYT13Q7L8C5 426 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 CA13Q8N1Q1 262 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 CYB561A3Q8NBI2 242 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 TMEM255BQ8WV15 326 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 RNF141Q8WVD5 230 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 AKR1E2Q96JD6 320 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 HS6ST2Q96MM7 605 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 TGM7Q96PF1 710 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 UTP23Q9BRU9 249 aaKnown RBP12.65□□□□□ -0.39
LIG1-203ENST00000536218 NOX4Q9NPH5 578 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 MMP26Q9NRE1 261 aa12.65□□□□□ -0.39
LIG1-203ENST00000536218 ZNF443Q9Y2A4 671 aaPredicted RBP12.65□□□□□ -0.39
LIG1-203ENST00000536218 IGHV1OR15-9A0A0B4J2B8 117 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 GXYLT2A0PJZ3 443 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 ITPKBP27987 946 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 DDTP30046 118 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 ST3GAL3Q11203 375 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 DEFB133Q30KQ1 61 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 PRPF38BQ5VTL8 546 aaKnown RBP12.64□□□□□ -0.39
LIG1-203ENST00000536218 MAMDC2Q7Z304 686 aaPredicted RBP12.64□□□□□ -0.39
LIG1-203ENST00000536218 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 OR10D4PQ8NGN7 298 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 RGP1Q92546 391 aaPredicted RBP12.64□□□□□ -0.39
LIG1-203ENST00000536218 POM121Q96HA1 1249 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 SOX7Q9BT81 388 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 TMEM27Q9HBJ8 222 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 RNASEK-C17orf49H0YIS7 233 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 PRKNO60260 465 aaPredicted RBP12.64□□□□□ -0.39
LIG1-203ENST00000536218 ARG1P05089 322 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 ACKR3P25106 362 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 NDUFA6P56556 154 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 TAS2R43P59537 309 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 GUCA2AQ02747 115 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 SURF2Q15527 256 aaPredicted RBP12.64□□□□□ -0.39
LIG1-203ENST00000536218 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 GID4Q8IVV7 300 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 RFLNBQ8N5W9 214 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 DIO2Q92813 273 aa12.64□□□□□ -0.39
LIG1-203ENST00000536218 UBQLN3Q9H347 655 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms