RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SKA3Q8IX90 412 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 C10orf53Q8N6V4 93 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 LRRC75AQ8NAA5 344 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 ZSCAN1Q8NBB4 408 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 RASD2Q96D21 266 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 MVB12AQ96EY5 273 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 OR14A2Q96R54 314 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 FRG2CA6NGY1 282 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 BLOC1S5-TXNDC5H3BN57 136 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 TXNL1O43396 289 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 CD27P26842 260 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 ALG10Q5BKT4 473 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 TSSK4Q6SA08 328 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 FAM220AQ7Z4H9 259 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 LMX1AQ8TE12 382 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 LAT2Q9GZY6 243 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 CHRDQ9H2X0 955 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 TMEM185BQ9H7F4 350 aa16.21■□□□□ 0.19
RAB40C-203ENST00000535977 ANKRD20A5PA0PJZ0 165 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 UTS2O95399 124 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 ASAH2BP0C7U1 165 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 CD38P28907 300 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 CDKN2AP42771 156 aaKnown RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 EIF2S3LQ2VIR3 472 aaKnown RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 C9orf152Q5JTZ5 239 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 SLC36A1Q7Z2H8 476 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 CARFQ8N187 725 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 DNAAF1Q8NEP3 725 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 TSTD1Q8NFU3 115 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 PTPMT1Q8WUK0 201 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 MMP25Q9NPA2 562 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 CARHSP1Q9Y2V2 147 aaKnown RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 AK6Q9Y3D8 172 aaKnown RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 BRWD1Q9NSI6 2320 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 TMEM272A0A1B0GTI8 110 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 OR6C76A6NM76 312 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 HSPB2A8KAH6 182 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 GPX4P36969 197 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 AQP2P41181 271 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 CTXN1P60606 82 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 SRSF3P84103 164 aaKnown RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 HSPB2Q16082 182 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 C10orf91Q5T1B1 145 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 Q6ZS52 159 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 EID2Q8N6I1 236 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 Q96M85 177 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 PDCD1LG2Q9BQ51 273 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 TTTY10Q9BZA0 68 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 SLITRK2Q9H156 845 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 NOX4Q9NPH5 578 aa16.2■□□□□ 0.18
RAB40C-203ENST00000535977 TDRD6O60522 2096 aaKnown RBP16.2■□□□□ 0.18
RAB40C-203ENST00000535977 TRAV14DV4A0A0A6YYC5 116 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 IGHV1OR15-9A0A0B4J2B8 117 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 RFPL4AA6NLU0 287 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 ZNF729A6NN14 1252 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 RFPL4AL1F8VTS6 287 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 MAGEB4O15481 346 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 ZNF432O94892 652 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 OR2B11Q5JQS5 317 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 TMEM71Q6P5X7 295 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 C11orf88Q6PI97 169 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 Q7L0L9 218 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 ZNF546Q86UE3 836 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 MUC20Q8N307 709 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 EXD3Q8N9H8 876 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 C15orf40Q8WUR7 153 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 ZNRF4Q8WWF5 429 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 FCAMRQ8WWV6 532 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 TGM7Q96PF1 710 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 PCED1AQ9H1Q7 454 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 LANCL2Q9NS86 450 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 IGHV5-51A0A0C4DH38 117 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 HEXAP06865 529 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 PPM1FP49593 454 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 LSRQ86X29 649 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 DERL3Q96Q80 235 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 PNO1Q9NRX1 252 aaKnown RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 TAS2R10Q9NYW0 307 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 GRHPRQ9UBQ7 328 aa16.19■□□□□ 0.18
RAB40C-203ENST00000535977 TMEM184BQ9Y519 407 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-203ENST00000535977 A0A1W2PR77 199 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 IFITM5A6NNB3 132 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 COLCA2A8K830 154 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 CCR4P51679 360 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 CD226Q15762 336 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 OGFOD3Q6PK18 319 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 MISPQ8IVT2 679 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 ADAD1Q96M93 576 aaKnown RBP16.18■□□□□ 0.18
RAB40C-203ENST00000535977 ADAM19Q9H013 955 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 ZNF576Q9H609 170 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 FKRPQ9H9S5 495 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 CUTCQ9NTM9 273 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 TMEM14AQ9Y6G1 99 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 V9GY05 133 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 METTL12A8MUP2 240 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 RLN1P04808 185 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 RAB40ALP0C0E4 278 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 PSMB10P40306 273 aa16.18■□□□□ 0.18
RAB40C-203ENST00000535977 RNF212Q495C1 297 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms