RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PSMB1P20618 241 aaKnown RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 MSX1P28360 303 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 ART1P52961 327 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 HSF1Q00613 529 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 MFGE8Q08431 387 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 PCOLCEQ15113 449 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 TMEM255AQ5JRV8 349 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 SFRP4Q6FHJ7 346 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 BPHLQ86WA6 291 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 TMPRSS12Q86WS5 348 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 C1orf210Q8IVY1 113 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 DND1Q8IYX4 353 aaKnown RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 OR5M1Q8NGP8 315 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 SLC22A8Q8TCC7 542 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 DACT3Q96B18 629 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 SPACA9Q96E40 222 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 MRGPRX4Q96LA9 322 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 WDR54Q9H977 334 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 GTF2A1LQ9UNN4 478 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 B3GALT1Q9Y5Z6 326 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 IGLV3-32A0A0A0MS00 114 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 ANKRD20A5PA0PJZ0 165 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 A6NIZ1 184 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 PRAF2O60831 178 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 TGM6O95932 706 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 SDHBP21912 280 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 CDK2P24941 298 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 PTGS2P35354 604 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 DAP3P51398 398 aaKnown RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 PER3P56645 1201 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 RAP1BP61224 184 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 RAP1AP62834 184 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 MYBPHQ13203 477 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 SLC25A53Q5H9E4 307 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 ZBTB37Q5TC79 503 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 KCTD18Q6PI47 426 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-202ENST00000535906 SLC26A10Q8NG04 563 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 C15orf40Q8WUR7 153 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 C5orf34Q96MH7 638 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 EMC6Q9BV81 110 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 POTEKPQ9BYX7 375 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 TMEM185BQ9H7F4 350 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 NKIRAS2Q9NYR9 191 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 LRP12Q9Y561 859 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 NPTNQ9Y639 398 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 FREM2Q5SZK8 3169 aa11.97□□□□□ -0.49
VPS33B-202ENST00000535906 ANXA2P2A6NMY6 339 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 KHDRBS3O75525 346 aaKnown RBP11.96□□□□□ -0.49
VPS33B-202ENST00000535906 TPPPO94811 219 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 LDOC1O95751 146 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-202ENST00000535906 HPXP02790 462 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 ANXA2P07355 339 aaKnown RBP11.96□□□□□ -0.49
VPS33B-202ENST00000535906 UMODP07911 640 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 ZFP36L1Q07352 338 aaKnown RBP11.96□□□□□ -0.49
VPS33B-202ENST00000535906 CAMK2DQ13557 499 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 OLFML2AQ68BL7 652 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 AGBL5Q8NDL9 886 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 OR52N5Q8NH56 324 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 TSEN15Q8WW01 171 aaKnown RBP11.96□□□□□ -0.49
VPS33B-202ENST00000535906 ZC3H10Q96K80 434 aaKnown RBP11.96□□□□□ -0.49
VPS33B-202ENST00000535906 BEX1Q9HBH7 125 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 DLL4Q9NR61 685 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 SDHAF3Q9NRP4 125 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.49
VPS33B-202ENST00000535906 LOC102723996A0A087X1L8 192 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 TSC22D2O75157 780 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 KLF7O75840 302 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-202ENST00000535906 CER1O95813 267 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 KLK3P07288 261 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-202ENST00000535906 RIDAP52758 137 aaKnown RBP11.96□□□□□ -0.5
VPS33B-202ENST00000535906 SCAND1P57086 179 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 PLA2G7Q13093 441 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 ASPHD2Q6ICH7 369 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 LINC00346Q8IVM7 164 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-202ENST00000535906 WDSUB1Q8N9V3 476 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 OR2M3Q8NG83 312 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 OR8H1Q8NGG4 311 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 MR1Q95460 341 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 ALKBH4Q9NXW9 302 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 B3GAT1Q9P2W7 334 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-202ENST00000535906 SCP2D1Q9UJQ7 156 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 FBXL3Q9UKT7 428 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 ELF5Q9UKW6 265 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-202ENST00000535906 FLVCR2Q9UPI3 526 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 B3GALT5Q9Y2C3 310 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 CHCHD2Q9Y6H1 151 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-202ENST00000535906 TECTAO75443 2155 aa11.96□□□□□ -0.5
VPS33B-202ENST00000535906 IGHV1-45A0A0A0MS14 117 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 NPIPB13A6NJU9 1138 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 NPIPB4C9JG80 1138 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 ACOT7O00154 380 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 TPOP07202 933 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 TMIGD3P0DMS9 266 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-202ENST00000535906 PTHLHP12272 177 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 CSRP1P21291 193 aaKnown RBP11.95□□□□□ -0.5
VPS33B-202ENST00000535906 VEGFCP49767 419 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 MAP2K6P52564 334 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms