RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 RAB39AQ14964 217 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 TRIP10Q15642 601 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 SNAPC1Q16533 368 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 MEP1BQ16820 701 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 ZIK1Q3SY52 487 aaPredicted RBP10.48□□□□□ -0.73
CHD4-203ENST00000535717 C12orf73Q69YU5 71 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 ADAM5Q6NVV9 412 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 TMEM53Q6P2H8 277 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 PLBD1Q6P4A8 553 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 ZNF704Q6ZNC4 412 aaPredicted RBP10.48□□□□□ -0.73
CHD4-203ENST00000535717 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.48□□□□□ -0.73
CHD4-203ENST00000535717 ZNF584Q8IVC4 421 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 PROKR2Q8NFJ6 384 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 KBTBD8Q8NFY9 601 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 OR51L1Q8NGJ5 315 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 LILRB1Q8NHL6 650 aaPredicted RBP10.48□□□□□ -0.73
CHD4-203ENST00000535717 OTULINQ96BN8 352 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 PLEKHA8Q96JA3 519 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 TEX12Q9BXU0 123 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 KCNN2Q9H2S1 579 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 DCLRE1BQ9H816 532 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 PLEKHF2Q9H8W4 249 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 RNF121Q9H920 327 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 CCNB1IP1Q9NPC3 277 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 NKX1-2Q9UD57 310 aaPredicted RBP10.48□□□□□ -0.73
CHD4-203ENST00000535717 ORC6Q9Y5N6 252 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 SHISA9B4DS77 424 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 PRR23D1E9PI22 279 aaPredicted RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 M0R129 80 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 PRKYO43930 277 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 SERPINA5P05154 406 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 RPSAP08865 295 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 PRR23D2P0DMB1 279 aaPredicted RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 PAICSP22234 425 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 RAD23AP54725 363 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 PCBD1P61457 104 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 LSM6P62312 80 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 EFNB1P98172 346 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 PSG4Q00888 419 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 NAAAQ02083 359 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 TEKQ02763 1124 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 LRRC36Q1X8D7 754 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 PABPC1L2AQ5JQF8 200 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 LPCAT4Q643R3 524 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 LYPD4Q6UWN0 246 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 CPOQ8IVL8 374 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 CPEB3Q8NE35 698 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 NRGNQ92686 78 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 NEUROG1Q92886 237 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 MBOAT4Q96T53 435 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 TSC22D3Q99576 134 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 GRIP2Q9C0E4 1043 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 OR2H1Q9GZK4 316 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 FAM192AQ9GZU8 254 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 WNT5BQ9H1J7 359 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 TOR3AQ9H497 397 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 HEATR1Q9H583 2144 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 HINT3Q9NQE9 182 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 MRPL22Q9NWU5 206 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 FBXL3Q9UKT7 428 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 MOKQ9UQ07 419 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 TIMM10BQ9Y5J6 103 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 PLCE1Q9P212 2302 aa10.47□□□□□ -0.73
CHD4-203ENST00000535717 ANKRD17O75179 2603 aaKnown RBP10.47□□□□□ -0.73
CHD4-203ENST00000535717 NAV2Q8IVL1 2488 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 IGHV2OR16-5A0A0B4J2B6 119 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 TVP23AA6NH52 213 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 CYSRT1A8MQ03 144 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 E9PQ18 207 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 ATP6V1G2-DDX39BF2Z307 99 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 CASQ2O14958 399 aaPredicted RBP10.46□□□□□ -0.73
CHD4-203ENST00000535717 SNAP29O95721 258 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 HLA-DQA2P01906 255 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 CRYAAP02489 173 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 PEX2P28328 305 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 CALCRP30988 508 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 GGT2P36268 569 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 ZNF672Q499Z4 452 aaPredicted RBP10.46□□□□□ -0.73
CHD4-203ENST00000535717 LINC01590Q5TEZ4 76 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 SLC22A25Q6T423 547 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 CXXC5Q7LFL8 322 aaKnown RBP10.46□□□□□ -0.73
CHD4-203ENST00000535717 SYT9Q86SS6 491 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 TCEANCQ8N8B7 351 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 ZNF511Q8NB15 262 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 BBS1Q8NFJ9 593 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 OR6K6Q8NGW6 343 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 AKR7LQ8NHP1 331 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 AKAP1Q92667 903 aaKnown RBP eCLIP10.46□□□□□ -0.732e-8■■□□□ 12.3
CHD4-203ENST00000535717 RADILQ96JH8 1075 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 LURAP1Q96LR2 239 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 PRRG3Q9BZD7 231 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 OR51V1Q9H2C8 321 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 LIME1Q9H400 295 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 ASH2LQ9UBL3 628 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 LHFPL6Q9Y693 200 aa10.46□□□□□ -0.73
CHD4-203ENST00000535717 CSMD2Q7Z408 3487 aa10.45□□□□□ -0.74
CHD4-203ENST00000535717 RTTNQ86VV8 2226 aa10.45□□□□□ -0.74
CHD4-203ENST00000535717 IQCMA0A1B0GVH7 501 aa10.45□□□□□ -0.74
CHD4-203ENST00000535717 DLGAP1O14490 977 aa10.45□□□□□ -0.74
CHD4-203ENST00000535717 TLX2O43763 284 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms