RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CRLF2Q9HC73 371 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 SLC40A1Q9NP59 571 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 MRPS30Q9NP92 439 aaKnown RBP2.7□□□□□ -1.98
PRKDC-205ENST00000535375 CNTNAP1P78357 1384 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 TTC41PQ6P2S7 1318 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 TRAV40A0A0B4J280 105 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 PLAC8L1A1L4L8 177 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 LRRIQ4A6NIV6 560 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 COLCA2A8K830 154 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 DYNC1I1O14576 645 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 ANXA5P08758 320 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 CCNB1P14635 433 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 SLC2A5P22732 501 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 STOMP27105 288 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 NAMPTP43490 491 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 LIPEQ05469 1076 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 SELENBP1Q13228 472 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 REEP3Q6NUK4 255 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 TMEM53Q6P2H8 277 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 CNIH2Q6PI25 160 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 LYPD2Q6UXB3 125 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 Q6ZR03 302 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 CCDC73Q6ZRK6 1079 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 SLC16A14Q7RTX9 510 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 PEX26Q7Z412 305 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 GABRG1Q8N1C3 465 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 SGK3Q96BR1 496 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 C8orf44Q96CB5 159 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 AURKBQ96GD4 344 aaPredicted RBP2.69□□□□□ -1.98
PRKDC-205ENST00000535375 SIRT7Q9NRC8 400 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 PSME2Q9UL46 239 aa2.69□□□□□ -1.98
PRKDC-205ENST00000535375 TRAV39A0A0B4J263 110 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 TRAV25A0A0B4J276 109 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 LRRIQ3A6PVS8 624 aaPredicted RBP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 CDC7O00311 574 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 DNAJB6O75190 326 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 BGLAPP02818 100 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 ERCC1P07992 297 aaPredicted RBP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 GZMAP12544 262 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 ZNF30P17039 623 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 OMGP23515 440 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 SLC1A1P43005 524 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 RFX3P48380 749 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 CSNK1EP49674 416 aaKnown RBP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 RORCP51449 518 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 CCR8P51685 355 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 YWHAGP61981 247 aaKnown RBP eCLIP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 AQP6Q13520 282 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 ITIH4Q14624 930 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 STK11Q15831 433 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 PGGHGQ32M88 737 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 CHRFAM7AQ494W8 412 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 FBXW9Q5XUX1 488 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 SSX9Q7RTT3 188 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 MMAAQ8IVH4 418 aaKnown RBP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 LIX1Q8N485 282 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 COMMD1Q8N668 190 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 EID2Q8N6I1 236 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 OR10R2Q8NGX6 335 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 PEX13Q92968 403 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 MED8Q96G25 268 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 LYARQ9NX58 379 aaKnown RBP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 MTCH1Q9NZJ7 389 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 ZNF629Q9UEG4 869 aaPredicted RBP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 CD84Q9UIB8 345 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 ZNF222Q9UK12 451 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 TBC1D24Q9ULP9 559 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 ING4Q9UNL4 249 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 F11RQ9Y624 299 aaKnown RBP2.68□□□□□ -1.98
PRKDC-205ENST00000535375 LRP4O75096 1905 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 IGSF9BQ9UPX0 1349 aa2.68□□□□□ -1.98
PRKDC-205ENST00000535375 PLA2R1Q13018 1463 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 A0A0B4J2A0 478 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 C7orf66A4D0T2 115 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 NCF1BA6NI72 391 aaPredicted RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 NCF1CA8MVU1 366 aaPredicted RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 EIF4E2O60573 245 aaKnown RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 VAMP5O95183 116 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 SMIM10L1P0DMW3 83 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 PSMC3P17980 439 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 DCKP27707 260 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 SERPINB5P36952 375 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 RPS5P46782 204 aaKnown RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 CX3CR1P49238 355 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 MRPL19P49406 292 aaKnown RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 ADARB1P78563 741 aaKnown RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 ILKQ13418 452 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 ANKRD26P1Q6NSI1 321 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 EIF3MQ7L2H7 374 aaKnown RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 UBALD2Q8IYN6 164 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 KATNAL2Q8IYT4 538 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 BPIFCQ8NFQ6 507 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 OR5W2Q8NH69 310 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 CXorf40AQ8TE69 158 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 RMI2Q96E14 147 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 PIK3IP1Q96FE7 263 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 SMIM10Q96HG1 83 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 PKNOX2Q96KN3 472 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 ANP32EQ9BTT0 268 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms