RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 THNSL2Q86YJ6 484 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ARMC10Q8N2F6 343 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 MFSD8Q8NHS3 518 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 SMAP2Q8WU79 429 aaPredicted RBP8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF524Q96C55 264 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 KCNJ15Q99712 375 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 GPA33Q99795 319 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 KLHL9Q9P2J3 617 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 EXOSC1Q9Y3B2 195 aaKnown RBP8.2□□□□□ -1.1
SF3B2-216ENST00000534765 U3KQA8 63 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 MGAQ8IWI9 3026 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ZAR1LA6NP61 321 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 THBS1P07996 1170 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ABOP16442 354 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 TBXA2RP21731 343 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 AGTR1P30556 359 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 PCGF2P35227 344 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 NXPH1P58417 271 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 BTG2P78543 158 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 LASP1Q14847 261 aaKnown RBP8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ZNHIT3Q15649 155 aaPredicted RBP8.2□□□□□ -1.1
SF3B2-216ENST00000534765 AADACL4Q5VUY2 407 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 YOD1Q5VVQ6 348 aaPredicted RBP8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF585AQ6P3V2 769 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 SLC36A4Q6YBV0 504 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 FAM219AQ8IW50 185 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 SLC16A11Q8NCK7 471 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 DCUN1D4Q92564 292 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF582Q96NG8 517 aaPredicted RBP8.2□□□□□ -1.1
SF3B2-216ENST00000534765 METTL9Q9H1A3 318 aa8.2□□□□□ -1.1
SF3B2-216ENST00000534765 E9PQ18 207 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 M0R3H8 397 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RDH16O75452 317 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 UBL3O95164 117 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 TUBG1P23258 451 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 CMPK1P30085 196 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 PKIAP61925 76 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 MGAT2Q10469 447 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 PPA1Q15181 289 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 SYT14P1Q58G82 188 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 C1orf189Q5VU69 101 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 B3GNTL1Q67FW5 361 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ACSM5Q6NUN0 579 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RPTNQ6XPR3 784 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 SPNS3Q6ZMD2 512 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RNF44Q7L0R7 432 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 C17orf82Q86X59 251 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 STEAP2Q8NFT2 490 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 OR2AK2Q8NG84 335 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 XAGE5Q8WWM1 108 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 PPP1R14DQ9NXH3 145 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 CHRNA9Q9UGM1 479 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF230Q9UIE0 474 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 HIF3AQ9Y2N7 669 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ENPP4Q9Y6X5 453 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 NPIPA5A0A0B4J1W7 369 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 NPIPA7E9PJI5 369 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 UBE2CO00762 179 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 OR8U8P0C7N1 319 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 NPIPA8P0DM63 369 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ARAFP10398 606 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 MGMTP16455 207 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RAB4AP20338 218 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 BTCP35070 178 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 SHC2P98077 582 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 EXOSC7Q15024 291 aaKnown RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF321PQ8N8H1 164 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 OR4C15Q8NGM1 316 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 COL26A1Q96A83 441 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 LMF1Q96S06 567 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RHOFQ9HBH0 211 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 SPACA1Q9HBV2 294 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RASL12Q9NYN1 266 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 CNIH4Q9P003 139 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ZNF282Q9UDV7 671 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 OPN4Q9UHM6 478 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 DAPP1Q9UN19 280 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ZC3H12DA2A288 527 aaKnown RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 CDC40O60508 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 SCGNO76038 276 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ACTL6AO96019 429 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 MT-ND4LP03901 98 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RPS2P15880 293 aaKnown RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 MUC1P15941 1255 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 RAB5AP20339 215 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 MST1P26927 711 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 CEBPEQ15744 281 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 PPP1R3BQ86XI6 285 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 OR4N2Q8NGD1 307 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 NT5CQ8TCD5 201 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 SMPDL3BQ92485 455 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ANKRD9Q96BM1 317 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 C5orf34Q96MH7 638 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 ELF4Q99607 663 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 PCBD2Q9H0N5 130 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 MED9Q9NWA0 146 aa8.19□□□□□ -1.1
SF3B2-216ENST00000534765 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-216ENST00000534765 SIT1Q9Y3P8 196 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms