RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	NUDT6	P53370	316 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	TNK1	Q13470	666 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	MSMP	Q1L6U9	139 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	SLC35F1	Q5T1Q4	408 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	DNM1P34	Q6PK57	102 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	UGT2A3	Q6UWM9	527 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	CD300LD	Q6UXZ3	194 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	CIART	Q8N365	385 aa	Predicted RBP	12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	SVOPL	Q8N434	492 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	GIPC3	Q8TF64	312 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	MRPL24	Q96A35	216 aa	Known RBP	12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	POM121L2	Q96KW2	1035 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	TSSK2	Q96PF2	358 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	SRA1	Q9HD15	236 aa	Known RBP	12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	EMC7	Q9NPA0	242 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	ARFGEF3	Q5TH69	2177 aa		12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	FLNA	P21333	2647 aa	Known RBP	12.51	□□□□□ -0.41
CTSB-231	ENST00000534382	ARRDC5	A6NEK1	342 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	DCTN6	O00399	190 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	FKBP6	O75344	327 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	MPZL1	O95297	269 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	F12	P00748	615 aa	Predicted RBP	12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	FAM157B	P0CG42	384 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	CCNO	P22674	350 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	RAD52	P43351	418 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	PPOX	P50336	477 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	GDI2	P50395	445 aa	Known RBP	12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	UCP2	P55851	309 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	LSM6	P62312	80 aa	Known RBP	12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	CBX1	P83916	185 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	COX10	Q12887	443 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	KCNMB1	Q16558	191 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	DNM1P46	Q6ZS02	220 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	TMEM179B	Q7Z7N9	219 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	OR6V1	Q8N148	313 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	NPEPL1	Q8NDH3	523 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	OR52E2	Q8NGJ4	325 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	OR8D4	Q8NGM9	314 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	SLCO4A1	Q96BD0	722 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	COX4I2	Q96KJ9	171 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	FEV	Q99581	238 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	VRK1	Q99986	396 aa	Predicted RBP	12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	NIPSNAP1	Q9BPW8	284 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	TSSK6	Q9BXA6	273 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	MRPL37	Q9BZE1	423 aa	Known RBP	12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	PLA2G12A	Q9BZM1	189 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	BCL2L14	Q9BZR8	327 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	RPRD1B	Q9NQG5	326 aa	Known RBP	12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	TBC1D23	Q9NUY8	699 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	DNAJB9	Q9UBS3	223 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	B9D1	Q9UPM9	204 aa		12.5	□□□□□ -0.41
CTSB-231	ENST00000534382	VPS13C	Q709C8	3753 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	LOC100509620	A0A075B734	347 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	IGLV1-36	A0A0B4J1U3	117 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	C5orf49	A4QMS7	147 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	OR6C68	A6NDL8	312 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	E2F6	O75461	281 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	SOX14	O95416	240 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	IGFBP1	P08833	259 aa	Predicted RBP	12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	CENPA	P49450	140 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	DSCR9	P59020	149 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	SCRN3	Q0VDG4	424 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	AQP6	Q13520	282 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	RGS7BP	Q6MZT1	257 aa	Predicted RBP	12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	ZNF774	Q6NX45	483 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	BIVM	Q86UB2	503 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	ZBTB46	Q86UZ6	589 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	LNX2	Q8N448	690 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	SDR9C7	Q8NEX9	313 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	C11orf40	Q8WZ69	217 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	SORCS2	Q96PQ0	1159 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	RHNO1	Q9BSD3	238 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	RACGAP1	Q9H0H5	632 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	PDP1	Q9P0J1	537 aa	Predicted RBP	12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	EIF3K	Q9UBQ5	218 aa	Known RBP	12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	BAIAP2	Q9UQB8	552 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	FKBP7	Q9Y680	259 aa		12.49	□□□□□ -0.41
CTSB-231	ENST00000534382	SMAD7	O15105	426 aa	Known RBP	12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	SGCE	O43556	437 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	GPANK1	O95872	356 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	TP53	P04637	393 aa	Predicted RBP	12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	LCK	P06239	509 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	COX5B	P10606	129 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	GLO1	Q04760	184 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	OTP	Q5XKR4	325 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	CLEC2A	Q6UVW9	174 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	LRP11	Q86VZ4	500 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	OR2T33	Q8NG76	320 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	OR10H5	Q8NGA6	315 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	DDO	Q99489	341 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	SYT3	Q9BQG1	590 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	RAB1B	Q9H0U4	201 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	OR51B6	Q9H340	312 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	GSX1	Q9H4S2	264 aa	Predicted RBP	12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	DYNLRB1	Q9NP97	96 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	ARMC1	Q9NVT9	282 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	ASH2L	Q9UBL3	628 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	DUSP13	Q9UII6	198 aa		12.48	□□□□□ -0.41

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