RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 NKAIN4Q8IVV8 208 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 SLC30A8Q8IWU4 369 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 ALDH16A1Q8IZ83 802 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 SPICQ8N5J4 248 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 SLC26A7Q8TE54 656 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 SGTBQ96EQ0 304 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 ZNF48Q96MX3 618 aaPredicted RBP17.98■□□□□ 0.47
SSH3-211ENST00000534112 CGREF1Q99674 301 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 OR2H1Q9GZK4 316 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 WNT5BQ9H1J7 359 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 KAT8Q9H7Z6 458 aaKnown RBP17.98■□□□□ 0.47
SSH3-211ENST00000534112 PATZ1Q9HBE1 687 aaKnown RBP17.98■□□□□ 0.47
SSH3-211ENST00000534112 C20orf141Q9NUB4 165 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 TMEM106BQ9NUM4 274 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 HMGB1P1B2RPK0 211 aaPredicted RBP17.97■□□□□ 0.47
SSH3-211ENST00000534112 TSPAN19P0C672 248 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 SLC6A9P48067 706 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 CD47Q08722 323 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 CDK5R2Q13319 367 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 LAPTM4AQ15012 233 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 MTX3Q5HYI7 312 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 SLC25A47Q6Q0C1 308 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 KLHL36Q8N4N3 616 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 DPP10Q8N608 796 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 TMEM255BQ8WV15 326 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 LIPHQ8WWY8 451 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 NDUFAF1Q9Y375 327 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 TIMM10BQ9Y5J6 103 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 INSIG2Q9Y5U4 225 aa17.97■□□□□ 0.47
SSH3-211ENST00000534112 NPIPB13A6NJU9 1138 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 POM121CA8CG34 1229 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 NPIPB4C9JG80 1138 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 TIMM8AO60220 97 aaPredicted RBP17.96■□□□□ 0.47
SSH3-211ENST00000534112 IGF2P01344 180 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 RNASE1P07998 156 aaKnown RBP17.96■□□□□ 0.47
SSH3-211ENST00000534112 LAP3P28838 519 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 PCGF2P35227 344 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 RBM34P42696 430 aaKnown RBP17.96■□□□□ 0.47
SSH3-211ENST00000534112 ARHGDIAP52565 204 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 CRYBA2P53672 197 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 SEC61A1P61619 476 aaKnown RBP17.96■□□□□ 0.47
SSH3-211ENST00000534112 IL13RA1P78552 427 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 PSG7Q13046 419 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 TMEM155Q4W5P6 130 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 LRRC28Q86X40 367 aaPredicted RBP17.96■□□□□ 0.47
SSH3-211ENST00000534112 SLC25A28Q96A46 364 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 C4orf45Q96LM5 186 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 MRI1Q9BV20 369 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 TXNIPQ9H3M7 391 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 RABEP2Q9H5N1 569 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 ELOVL3Q9HB03 270 aa17.96■□□□□ 0.47
SSH3-211ENST00000534112 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 CLDN34H7C241 214 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 CST2P09228 141 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 NR2C1P13056 603 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 TAF11Q15544 211 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 INTS11Q5TA45 600 aaKnown RBP17.95■□□□□ 0.46
SSH3-211ENST00000534112 ZNF774Q6NX45 483 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 ZER1Q7Z7L7 766 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 ZNF283Q8N7M2 679 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 OR10A6Q8NH74 314 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 TMEM239Q8WW34 195 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 RASSF5Q8WWW0 418 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 SAMD8Q96LT4 415 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 SH3GLB1Q9Y371 365 aa17.95■□□□□ 0.46
SSH3-211ENST00000534112 TAS2R41P59536 307 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 PCBD1P61457 104 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 BTG1P62324 171 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 ZMYND11Q15326 602 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 CCDC80Q76M96 950 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 CLDN22Q8N7P3 220 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 LRRC8CQ8TDW0 803 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 TAF15Q92804 592 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSH3-211ENST00000534112 RBP7Q96R05 134 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 ALG12Q9BV10 488 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 MS4A7Q9GZW8 240 aaPredicted RBP17.94■□□□□ 0.46
SSH3-211ENST00000534112 RIMS3Q9UJD0 308 aa17.94■□□□□ 0.46
SSH3-211ENST00000534112 A8MXK9 166 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 F5H0A9 414 aaPredicted RBP17.93■□□□□ 0.46
SSH3-211ENST00000534112 ANGPT2O15123 496 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 OR5F1O95221 314 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 TNFRSF1AP19438 455 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 TNFRSF1BP20333 461 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 TNFSF4P23510 183 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 GUCA1AP43080 201 aaPredicted RBP17.93■□□□□ 0.46
SSH3-211ENST00000534112 GZMMP51124 257 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 PAX8Q06710 450 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 TOP3AQ13472 1001 aaPredicted RBP17.93■□□□□ 0.46
SSH3-211ENST00000534112 PIN1Q13526 163 aaPredicted RBP17.93■□□□□ 0.46
SSH3-211ENST00000534112 SLC9A3R2Q15599 337 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 VMACQ2NL98 169 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 ARL9Q6T311 187 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 OR2Z1Q8NG97 314 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 SIGLEC11Q96RL6 698 aa17.93■□□□□ 0.46
SSH3-211ENST00000534112 SHOX2O60902 331 aaPredicted RBP17.92■□□□□ 0.46
SSH3-211ENST00000534112 ABHD16AO95870 558 aa17.92■□□□□ 0.46
SSH3-211ENST00000534112 GSTM3P21266 225 aa17.92■□□□□ 0.46
SSH3-211ENST00000534112 CD80P33681 288 aa17.92■□□□□ 0.46
SSH3-211ENST00000534112 RPL27P61353 136 aaKnown RBP17.92■□□□□ 0.46
SSH3-211ENST00000534112 NFYCQ13952 458 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms