RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 RLIMQ9NVW2 624 aa8.54□□□□□ -1.04
CSDE1-215ENST00000533818 NDRG4Q9ULP0 352 aaKnown RBP8.54□□□□□ -1.04
CSDE1-215ENST00000533818 JRKLQ9Y4A0 524 aa8.54□□□□□ -1.04
CSDE1-215ENST00000533818 SMAD5-AS1Q9Y6J3 95 aa8.54□□□□□ -1.04
CSDE1-215ENST00000533818 HECTD4Q9Y4D8 3996 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ELOVL7A1L3X0 281 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 F2RL2O00254 374 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 EIF3HO15372 352 aaKnown RBP eCLIP8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ADAM20O43506 726 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 SYNGR1O43759 233 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 SERPINI2O75830 405 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ECDO95905 644 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-215ENST00000533818 IRF2P14316 349 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 KITLGP21583 273 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 PRPH2P23942 346 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 RPL3P39023 403 aaKnown RBP8.53□□□□□ -1.04
CSDE1-215ENST00000533818 PMELP40967 661 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 SRP9P49458 86 aaKnown RBP8.53□□□□□ -1.04
CSDE1-215ENST00000533818 VEGFCP49767 419 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 DLX1P56177 255 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 DR1Q01658 176 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ACSM1Q08AH1 577 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 RFTN2Q52LD8 501 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-215ENST00000533818 LIPMQ5VYY2 423 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 TNFAIP8L2Q6P589 184 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ARL9Q6T311 187 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 NET1Q7Z628 596 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-215ENST00000533818 KLHL7Q8IXQ5 586 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 NATD1Q8N6N6 113 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ADPRHL1Q8NDY3 354 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 OR10AD1Q8NGE0 317 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 MIPOL1Q8TD10 442 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 C17orf50Q8WW18 174 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 MYDGFQ969H8 173 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 TMEM54Q969K7 222 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 CMBLQ96DG6 245 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ZNF607Q96SK3 696 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 CCNB1IP1Q9NPC3 277 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ATAD3AQ9NVI7 634 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 MKS1Q9NXB0 559 aa8.53□□□□□ -1.04
CSDE1-215ENST00000533818 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.04
CSDE1-215ENST00000533818 A0A087WUJ7 227 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 RNF103-CHMP3A0A140T963 221 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 SLC28A1O00337 649 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 IGF2P01344 180 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 MYF6P23409 242 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 ECI1P42126 302 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 VDAC2P45880 294 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-215ENST00000533818 BIDP55957 195 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 RPL38P63173 70 aaKnown RBP8.52□□□□□ -1.05
CSDE1-215ENST00000533818 KCNJ8Q15842 424 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 AANATQ16613 207 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 KHDC1LQ5JSQ8 128 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 ZCCHC23Q6ZST2 131 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 CMTM4Q8IZR5 234 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 AKR7LQ8NHP1 331 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 C4orf45Q96LM5 186 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 KCNN2Q9H2S1 579 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 MTHFD2LQ9H903 347 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-215ENST00000533818 TBCCD1Q9NVR7 557 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 SNX24Q9Y343 169 aa8.52□□□□□ -1.05
CSDE1-215ENST00000533818 PLECQ15149 4684 aaKnown RBP8.51□□□□□ -1.05
CSDE1-215ENST00000533818 ICMTO60725 284 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 GSTA1P08263 222 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 PRG2P13727 222 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 PAX6P26367 422 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 HTR5AP47898 357 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 UBE2E1P51965 193 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 CNN3Q15417 329 aaKnown RBP8.51□□□□□ -1.05
CSDE1-215ENST00000533818 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 TMEM95Q3KNT9 176 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 OVCH2Q7RTZ1 564 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 CENPVQ7Z7K6 275 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-215ENST00000533818 SLC38A4Q969I6 547 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 HAVCR1Q96D42 359 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 COQ8BQ96D53 544 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 SLC38A1Q9H2H9 487 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 POFUT1Q9H488 388 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 ALMS1Q8TCU4 4167 aa8.51□□□□□ -1.05
CSDE1-215ENST00000533818 TRAV36DV7A0A075B6V5 113 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 CDHR4A6H8M9 788 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 DVL1O14640 695 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 ALDOBP05062 364 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 DBIP07108 87 aaKnown RBP8.5□□□□□ -1.05
CSDE1-215ENST00000533818 ZNF32P17041 273 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 ATP5F1P24539 256 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-215ENST00000533818 MAGEA12P43365 314 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 RGS6P49758 472 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 PRKAA2P54646 552 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 IL5RAQ01344 420 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 PUDPQ08623 228 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 SFRP4Q6FHJ7 346 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-215ENST00000533818 ETV3LQ6ZN32 361 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 Q6ZS46 218 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 PXKQ7Z7A4 578 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 OR5AS1Q8N127 324 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 CCNYL1Q8N7R7 359 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 ANKFN1Q8N957 763 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 OR51D1Q8NGF3 324 aa8.5□□□□□ -1.05
CSDE1-215ENST00000533818 OR11L1Q8NGX0 322 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms