RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SLC17A1Q14916 467 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 BEX5Q5H9J7 111 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 CORO6Q6QEF8 472 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 STAC2Q6ZMT1 411 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF813Q6ZN06 617 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 IFI44Q8TCB0 444 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 PCDHGA1Q9Y5H4 931 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 LILRB5O75023 590 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 LPLP06858 475 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 RPS27AP62979 156 aaKnown RBP13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 UBA52P62987 128 aaKnown RBP13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 DYRK1AQ13627 763 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 RHEBQ15382 184 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 AADACL4Q5VUY2 407 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 ALKAL2Q6UX46 152 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 CADM4Q8NFZ8 388 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 WDFY2Q96P53 400 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 SIGLEC11Q96RL6 698 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 SCPEP1Q9HB40 452 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 MMP25Q9NPA2 562 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 PRAMEF27A3QJZ7 478 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 F8W036 122 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 IMPA2O14732 288 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 ATG12O94817 140 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 BLOC1S1P78537 153 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 OR4D11Q8NGI4 311 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 OR1N1Q8NGS0 311 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 RADILQ96JH8 1075 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 NEURL2Q9BR09 285 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 ERVMER34-1Q9H9K5 563 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 FAM60AQ9NP50 221 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 ING1Q9UK53 422 aaPredicted RBP13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 MN1Q10571 1320 aaPredicted RBP13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 IGHV5-51A0A0C4DH38 117 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 TBXA2RP21731 343 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 GALP22466 123 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 OR52N5Q8NH56 324 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 TTC9Q92623 222 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC22A13Q9Y226 551 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 PRELID1Q9Y255 219 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 TTLL8A6PVC2 850 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 CDC42EP2O14613 210 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 TK1P04183 234 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 CLDN20P56880 219 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 ZMYND11Q15326 602 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC25A35Q3KQZ1 300 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 THEM4Q5T1C6 240 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 DOK3Q7L591 496 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 MRGPRX4Q96LA9 322 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 DERL3Q96Q80 235 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 COPS3Q9UNS2 423 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 B9D1Q9UPM9 204 aa13.91□□□□□ -0.18
PCDHA3-202ENST00000532566 BPNT1O95861 308 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 F10P00742 488 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 QDPRP09417 244 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 CT62P0C5K7 136 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 PPP1CAP62136 330 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 PRR18Q8N4B5 295 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 COQ3Q9NZJ6 369 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 A0A1W2PS29 197 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 STK17BO94768 372 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 ANXA7P20073 488 aaKnown RBP13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 MSR1P21757 451 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 GPR85P60893 370 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 BCL2A1Q16548 175 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 THSD4Q6ZMP0 1018 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 ABI3BPQ7Z7G0 1075 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 ORAI1Q96D31 301 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF845Q96IR2 970 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 MOB1AQ9H8S9 216 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 CYSLTR2Q9NS75 346 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 OR2J2O76002 312 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 CRYZL1O95825 349 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 CBX7O95931 251 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 CELA2BP08218 269 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 GCH1P30793 250 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 EMP3P54852 163 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 SUMO3P55854 103 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 LINC00696Q6ZRV3 163 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 BPHLQ86WA6 291 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 PIGTQ969N2 578 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 KTI12Q96EK9 354 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC22A11Q9NSA0 550 aa13.9□□□□□ -0.18
PCDHA3-202ENST00000532566 SCN3AQ9NY46 2000 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 POM121CA8CG34 1229 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 MYF5P13349 255 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 LAP3P28838 519 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 ECH1Q13011 328 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 GRAMD2AQ8IUY3 354 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 PPP1R35Q8TAP8 253 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 CTSFQ9UBX1 484 aa13.9□□□□□ -0.19
PCDHA3-202ENST00000532566 A0A1B0GV50 99 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 NRG2O14511 850 aaPredicted RBP13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 TMEM127O75204 238 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 ABHD16AO95870 558 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 IFNA2P01563 188 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 STK11Q15831 433 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 OR1M1Q8NGA1 313 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms