RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 LSM3P62310 102 aaKnown RBP19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 EIF2B1Q14232 305 aaKnown RBP19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 SGCAQ16586 387 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 ACSF3Q4G176 576 aaPredicted RBP19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 SPATC1Q76KD6 591 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 MCEMP1Q8IX19 187 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 SYS1Q8N2H4 156 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 C9orf106Q8NAJ2 232 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 ST7LQ8TDW4 575 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 MNTQ99583 582 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 GPR35Q9HC97 309 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 NCOA6Q14686 2063 aaPredicted RBP19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 AGTR1P30556 359 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 TGFBR1P36897 503 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 FOXG1P55316 489 aaPredicted RBP19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 AQP6Q13520 282 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 RTL6Q6ICC9 239 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 SLC18B1Q6NT16 456 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 SEM1Q6ZVN7 128 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 DCXRQ7Z4W1 244 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 P2RY8Q86VZ1 359 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 GPR137CQ8N3F9 429 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 GALNT11Q8NCW6 608 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 ZNF420Q8TAQ5 688 aaPredicted RBP19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 CXorf56Q9H5V9 222 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 PARPBPQ9NWS1 579 aa19.33■□□□□ 0.69
PACSIN3-209ENST00000532457 SHANK1Q9Y566 2161 aa19.33■□□□□ 0.68
PACSIN3-209ENST00000532457 CELP19835 753 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 P4HA3Q7Z4N8 544 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 TMEM203Q969S6 136 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 TRMT61AQ96FX7 289 aaKnown RBP19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 MAP6Q96JE9 813 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 SLCO5A1Q9H2Y9 848 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 RNF167Q9H6Y7 350 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 NDUFB11Q9NX14 153 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 ST6GALNAC2Q9UJ37 374 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 TMEM14AQ9Y6G1 99 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 METTL15A6NJ78 407 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 VGLL3A8MV65 326 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 PRRG2O14669 202 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 GPX5O75715 221 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 GABARAPO95166 117 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 NR2C1P13056 603 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 CRYBB2P43320 205 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 ACTA2P62736 377 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 RPS25P62851 125 aaKnown RBP19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 ACTG2P63267 376 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 CEACAM16Q2WEN9 425 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 RIPPLY2Q5TAB7 128 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 LRRN1Q6UXK5 716 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 GCNT2Q8N0V5 402 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 OR10S1Q8NGN2 331 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF416Q9BWM5 594 aa19.32■□□□□ 0.68
PACSIN3-209ENST00000532457 SLC19A2O60779 497 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 TPOP07202 933 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 ROR2Q01974 943 aaKnown RBP19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 EGR3Q06889 387 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 ENDOGQ14249 297 aaKnown RBP19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 SF3B4Q15427 424 aaKnown RBP eCLIP19.31■□□□□ 0.681e-6■■■■□ 19.6
PACSIN3-209ENST00000532457 GUSBP1Q15486 140 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 LIPNQ5VXI9 398 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF454Q8N9F8 522 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 OR10H5Q8NGA6 315 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 WNT2BQ93097 391 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 GMPPAQ96IJ6 420 aaPredicted RBP19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 OR8B4Q96RC9 309 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 TM9SF2Q99805 663 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 CDADC1Q9BWV3 514 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 LINC00470Q9BZP3 86 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 C12orf49Q9H741 205 aa19.31■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF701M0R085 212 aaPredicted RBP19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 SS18L1O75177 396 aaPredicted RBP19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 FCGR2AP12318 317 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 PCSK6P29122 969 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 CASP6P55212 293 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 SIRPAP78324 504 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 BDH1Q02338 343 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 ROM1Q03395 351 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 NSUN5P2Q63ZY6 315 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 CFAP77Q6ZQR2 320 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 RPRMLQ8N4K4 120 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 FAM57AQ8TBR7 257 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 HSD17B8Q92506 261 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 UFD1Q92890 307 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 DCLRE1CQ96SD1 692 aaKnown RBP19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 ELOVL3Q9HB03 270 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 GP6Q9HCN6 339 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 PRSS50Q9UI38 385 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 IKZF2Q9UKS7 526 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF835Q9Y2P0 537 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 TRIM64BA6NI03 449 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 OGG1O15527 345 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 SULT1C4O75897 302 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 RPP14O95059 124 aaKnown RBP19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 NANOS3P60323 173 aaKnown RBP19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 VBP1P61758 197 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 NCS1P62166 190 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 MRPS34P82930 218 aaKnown RBP19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 SPCS2Q15005 226 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 LRRC18Q8N456 261 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms