RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 ZNF679Q8IYX0 411 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 ZFP41Q8N8Y5 198 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 NDNFQ8TB73 568 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 SMIM19Q96E16 107 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 MROQ9BYG7 248 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 DCSTAMPQ9H295 470 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 GP6Q9HCN6 339 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 SPRR3Q9UBC9 169 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 KLHDC2Q9Y2U9 406 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 ZNF175Q9Y473 711 aa18.75■□□□□ 0.59
VPS28-212ENST00000530836 PNMA8CA0A1B0GUJ8 204 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 A0A1W2PPL8 197 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 FCGR2AP12318 317 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 SERPINB10P48595 397 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 SELENOPP49908 381 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 ZNF84P51523 738 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 RPS25P62851 125 aaKnown RBP18.74■□□□□ 0.59
VPS28-212ENST00000530836 LSAMPQ13449 338 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 EIF2B1Q14232 305 aaKnown RBP18.74■□□□□ 0.59
VPS28-212ENST00000530836 CDK5R1Q15078 307 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 DGUOKQ16854 277 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 RIPPLY2Q5TAB7 128 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 DEGS2Q6QHC5 323 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 YIPF7Q8N8F6 280 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 ABHD3Q8WU67 409 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 C11orf40Q8WZ69 217 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 FOXN4Q96NZ1 517 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 OR8B4Q96RC9 309 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 TTTY10Q9BZA0 68 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 ULBP2Q9BZM5 246 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 PRDM14Q9GZV8 571 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 KCNN2Q9H2S1 579 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 BCO1Q9HAY6 547 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 PLSCR2Q9NRY7 297 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 ACOXLQ9NUZ1 547 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 MRM2Q9UI43 246 aaKnown RBP18.74■□□□□ 0.59
VPS28-212ENST00000530836 ST6GALNAC2Q9UJ37 374 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 IKZF2Q9UKS7 526 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 E9PI62 339 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 DHHO43323 396 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 ZNF254O75437 659 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 SERPINA3P01011 423 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 LSM6P62312 80 aaKnown RBP18.74■□□□□ 0.59
VPS28-212ENST00000530836 MEP1BQ16820 701 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 RHOUQ7L0Q8 258 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 GALNT11Q8NCW6 608 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 ST6GALNAC3Q8NDV1 305 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 OR52N5Q8NH56 324 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 DYNC2LI1Q8TCX1 351 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 TMEM203Q969S6 136 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 SARAFQ96BY9 339 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 ABHD6Q9BV23 337 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 SEC61A2Q9H9S3 476 aa18.74■□□□□ 0.59
VPS28-212ENST00000530836 TXNL4BQ9NX01 149 aaKnown RBP18.74■□□□□ 0.59
VPS28-212ENST00000530836 GPRIN2O60269 458 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 MPZL1O95297 269 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 ABHD16AO95870 558 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 LIPNQ5VXI9 398 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 ZNF544Q6NX49 715 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 ARL9Q6T311 187 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 FOXL2NBQ6ZUU3 175 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.73■□□□□ 0.59
VPS28-212ENST00000530836 MCEMP1Q8IX19 187 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 KCTD7Q96MP8 289 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 TM9SF2Q99805 663 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 TMED9Q9BVK6 235 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 CXorf56Q9H5V9 222 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 CYB5R1Q9UHQ9 305 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 ING1Q9UK53 422 aaPredicted RBP18.73■□□□□ 0.59
VPS28-212ENST00000530836 CAMK2AQ9UQM7 478 aa18.73■□□□□ 0.59
VPS28-212ENST00000530836 NOSIPQ9Y314 301 aaKnown RBP18.73■□□□□ 0.59
VPS28-212ENST00000530836 SIRT4Q9Y6E7 314 aaPredicted RBP18.73■□□□□ 0.59
VPS28-212ENST00000530836 NBASA2RRP1 2371 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 TRBV2A0A0J9YWF9 115 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 MRPL33O75394 65 aaKnown RBP18.72■□□□□ 0.59
VPS28-212ENST00000530836 RGS9O75916 674 aaPredicted RBP18.72■□□□□ 0.59
VPS28-212ENST00000530836 OR8G3PP0DMU2 310 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 EDNRAP25101 427 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 FABP5Q01469 135 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 KRT77Q7Z794 578 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 GPR137CQ8N3F9 429 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 FNDC9Q8TBE3 224 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 RPS4Y2Q8TD47 263 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 NELFAQ9H3P2 528 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 C1orf198Q9H425 327 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 POLE4Q9NR33 117 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 UGT2A1Q9Y4X1 527 aa18.72■□□□□ 0.59
VPS28-212ENST00000530836 OR14I1A6ND48 311 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 PRR32B1ATL7 298 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 MAGEB4O15481 346 aaPredicted RBP18.71■□□□□ 0.59
VPS28-212ENST00000530836 UPK3AO75631 287 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 YES1P07947 543 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 NPR2P20594 1047 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 RPS27P42677 84 aaKnown RBP18.71■□□□□ 0.59
VPS28-212ENST00000530836 GDI2P50395 445 aaKnown RBP18.71■□□□□ 0.59
VPS28-212ENST00000530836 STK11Q15831 433 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 FDX2Q6P4F2 183 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 PAMR1Q6UXH9 720 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 GFRALQ6UXV0 394 aa18.71■□□□□ 0.59
VPS28-212ENST00000530836 LINC00299Q6ZSB3 139 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms