RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 AUP1Q9Y679 476 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 GMNCA6NCL1 334 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 DNAJC9-AS1A6NH13 148 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 IGHMP01871 453 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 CST2P09228 141 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 NR2C1P13056 603 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 ZNF12P17014 697 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 GZMMP51124 257 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 ARHGDIAP52565 204 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 TNFAIP6P98066 277 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 FMODQ06828 376 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 TAF11Q15544 211 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 TMEM155Q4W5P6 130 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 ARMCX4Q5H9R4 360 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 LRRC28Q86X40 367 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 BCL6BQ8N143 479 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 KLHL36Q8N4N3 616 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 OR10A6Q8NH74 314 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 NSMAFQ92636 917 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 C4orf45Q96LM5 186 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 C1orf147Q96MC9 270 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 DCLRE1CQ96SD1 692 aaKnown RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 POLR2J2Q9GZM3 115 aaKnown RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 POLR2J3Q9H1A7 115 aaKnown RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 TXNIPQ9H3M7 391 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 ELOVL3Q9HB03 270 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 PATZ1Q9HBE1 687 aaKnown RBP12.59□□□□□ -0.39
CAPN1-219ENST00000530495 TMEM106BQ9NUM4 274 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 DCAF16Q9NXF7 216 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 RIMS3Q9UJD0 308 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 SH3GLB1Q9Y371 365 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 INSIG2Q9Y5U4 225 aa12.59□□□□□ -0.39
CAPN1-219ENST00000530495 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 ANGPT2O15123 496 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 LAP3P28838 519 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 TAS2R41P59536 307 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 PCBD1P61457 104 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 CD47Q08722 323 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 PSG7Q13046 419 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 HNRNPA0Q13151 305 aaKnown RBP12.58□□□□□ -0.4
CAPN1-219ENST00000530495 VMACQ2NL98 169 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 MTX3Q5HYI7 312 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 FOXL2NBQ6ZUU3 175 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 SPICQ8N5J4 248 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 ZNF283Q8N7M2 679 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 FNDC8Q8TC99 324 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 TSPEARQ8WU66 669 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 TMEM239Q8WW34 195 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 SAMD8Q96LT4 415 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 DUX5Q96PT3 197 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 RBP7Q96R05 134 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 ALG12Q9BV10 488 aa12.58□□□□□ -0.4
CAPN1-219ENST00000530495 A8MXK9 166 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 CLDN34H7C241 214 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 TIMM8AO60220 97 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-219ENST00000530495 OR5F1O95221 314 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 RNASE1P07998 156 aaKnown RBP12.57□□□□□ -0.4
CAPN1-219ENST00000530495 THRBP10828 461 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 TUBG1P23258 451 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 GUCA1AP43080 201 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-219ENST00000530495 IL13RA1P78552 427 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 BAMBIQ13145 260 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 PIN1Q13526 163 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-219ENST00000530495 NFYCQ13952 458 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 ZNF774Q6NX45 483 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 ARL9Q6T311 187 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 STON2Q8WXE9 905 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 ZNF48Q96MX3 618 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-219ENST00000530495 MRI1Q9BV20 369 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 UNKLQ9H9P5 680 aaKnown RBP12.57□□□□□ -0.4
CAPN1-219ENST00000530495 TUBG2Q9NRH3 451 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 MAN2C1Q9NTJ4 1040 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 BAG5Q9UL15 447 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 HIF3AQ9Y2N7 669 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 MED31Q9Y3C7 131 aa12.57□□□□□ -0.4
CAPN1-219ENST00000530495 HTR3EA5X5Y0 456 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 TNFRSF1AP19438 455 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 TNFSF4P23510 183 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 RBMXP38159 391 aaKnown RBP12.56□□□□□ -0.4
CAPN1-219ENST00000530495 RPL27P61353 136 aaKnown RBP12.56□□□□□ -0.4
CAPN1-219ENST00000530495 SEC61A1P61619 476 aaKnown RBP12.56□□□□□ -0.4
CAPN1-219ENST00000530495 BTG1P62324 171 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 PAX8Q06710 450 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 ENDOGQ14249 297 aaKnown RBP12.56□□□□□ -0.4
CAPN1-219ENST00000530495 PDLIM3Q53GG5 364 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-219ENST00000530495 ALG10Q5BKT4 473 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 TREML4Q6UXN2 200 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 Q6ZR03 302 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 CLDN22Q8N7P3 220 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 SLC25A28Q96A46 364 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 SIGLEC11Q96RL6 698 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 TBCCD1Q9NVR7 557 aa12.56□□□□□ -0.4
CAPN1-219ENST00000530495 C12orf71A8MTZ7 269 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 F5H0A9 414 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-219ENST00000530495 PPIAL4GP0DN37 164 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 COX5BP10606 129 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 TNFRSF1BP20333 461 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 GSTM3P21266 225 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms