RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 OR5D14Q8NGL3 314 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 MMP25Q9NPA2 562 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 METTL12A8MUP2 240 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 AIPO00170 330 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ZNHIT1O43257 154 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 THY1P04216 161 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ERCC1P07992 297 aaPredicted RBP11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ACY1Q03154 408 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 PMPCAQ10713 525 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF74Q16587 644 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 VASH2Q86V25 355 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 HOXB13Q92826 284 aaPredicted RBP11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF845Q96IR2 970 aaPredicted RBP11.19□□□□□ -0.62
SCN3B-206ENST00000530277 C10orf90Q96M02 699 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 PRSS27Q9BQR3 290 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ABHD6Q9BV23 337 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 LDAHQ9H6V9 325 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 PLEKHJ1Q9NW61 149 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 COL4A6Q14031 1691 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 TCF20Q9UGU0 1960 aaKnown RBP11.19□□□□□ -0.62
SCN3B-206ENST00000530277 FCARP24071 287 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 TMEM244Q5VVB8 128 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 LYSMD4Q5XG99 296 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 NPSR1Q6W5P4 371 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 SLC22A18ASQ8N1D0 253 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ARL5BQ96KC2 179 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 GLTPQ9NZD2 209 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 STEAP1Q9UHE8 339 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 A0A1B0GX78 115 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ZFAND5O76080 213 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 CTLA4P16410 223 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 ABCD3P28288 659 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 CSNK1A1P48729 337 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 DAP3P51398 398 aaKnown RBP11.19□□□□□ -0.62
SCN3B-206ENST00000530277 EXOSC2Q13868 293 aaKnown RBP11.19□□□□□ -0.62
SCN3B-206ENST00000530277 CCINQ13939 588 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 PDCD1Q15116 288 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 RSU1Q15404 277 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 GRAMD2AQ8IUY3 354 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 OR4C16Q8NGL9 310 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
SCN3B-206ENST00000530277 NIPAL2Q9H841 368 aa11.19□□□□□ -0.62
SCN3B-206ENST00000530277 LAMTOR5O43504 91 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 FADS1O60427 444 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 NXPH3O95157 252 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 PDGFAP04085 211 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 NGFRP08138 427 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 P2RX1P51575 399 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 LUMP51884 338 aaPredicted RBP11.18□□□□□ -0.62
SCN3B-206ENST00000530277 WDR38Q5JTN6 314 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 C1orf53Q5VUE5 145 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF611Q8N823 705 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 CD300LFQ8TDQ1 290 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 MED30Q96HR3 178 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ULBP2Q9BZM5 246 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 TINAGL1Q9GZM7 467 aaPredicted RBP11.18□□□□□ -0.62
SCN3B-206ENST00000530277 HRH4Q9H3N8 390 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 C1orf198Q9H425 327 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 POFUT1Q9H488 388 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 SMOC1Q9H4F8 434 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GAREM1Q9H706 876 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 EHFQ9NZC4 300 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 PISDQ9UG56 409 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 CHRNA9Q9UGM1 479 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 A0A087WV48 116 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GABARAPH6UMI1 98 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 PHYHO14832 338 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 FOSL2P15408 326 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF93P35789 620 aaPredicted RBP11.18□□□□□ -0.62
SCN3B-206ENST00000530277 CLDN6P56747 220 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF585AQ6P3V2 769 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GPR137CQ8N3F9 429 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GTPBP8Q8N3Z3 284 aaPredicted RBP11.18□□□□□ -0.62
SCN3B-206ENST00000530277 OR1L3Q8NH93 324 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 DCBLD2Q96PD2 775 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 TRAPPC4Q9Y296 219 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 FREM3P0C091 2139 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 TRAV8-7A0A075B6U6 113 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 MEGF11A6BM72 1044 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 PLPP2O43688 288 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GUSBP08236 651 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GNB3P16520 340 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 BLVRBP30043 206 aaPredicted RBP11.18□□□□□ -0.62
SCN3B-206ENST00000530277 DOC2BQ14184 412 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 ARSKQ6UWY0 536 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 GSG1LQ6UXU4 331 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 CD300LDQ6UXZ3 194 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 YRDCQ86U90 279 aaKnown RBP11.18□□□□□ -0.62
SCN3B-206ENST00000530277 OR14A16Q8NHC5 309 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 PHB2Q99623 299 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 MED18Q9BUE0 208 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 WWTR1Q9GZV5 400 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 NPAP1Q9NZP6 1156 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 OR5V1Q9UGF6 321 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 MOKQ9UQ07 419 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 PRSS37A4D1T9 235 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 IGHG1P01857 330 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 P04436 131 aa11.18□□□□□ -0.62
SCN3B-206ENST00000530277 CT45A8P0DMV1 189 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms