RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SELENOFO60613 162 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 RAD51DO75771 328 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 APOL3O95236 402 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 HLA-DQA2P01906 255 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 DBTP11182 482 aaKnown RBP10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 CD79BP40259 229 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 MTNR1AP48039 350 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 ASCL1P50553 236 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 BLVRAP53004 296 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 FBXL19-AS1Q494R0 122 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 HIKESHIQ53FT3 197 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 FAM27BQ5VT28 67 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 ANKRD16Q6P6B7 361 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 XKRXQ6PP77 449 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 SKA3Q8IX90 412 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 TIGD4Q8IY51 512 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 SPARTQ8N0X7 666 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 SLC22A24Q8N4F4 322 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 ZNF808Q8N4W9 903 aaPredicted RBP10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 SSC4DQ8WTU2 575 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 SMAP2Q8WU79 429 aaPredicted RBP10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 RNFT2Q96EX2 444 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 DOK1Q99704 481 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 SH3GL3Q99963 347 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 SIAEQ9HAT2 523 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 ADGRL4Q9HBW9 690 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 PLCXD1Q9NUJ7 323 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 ELOVL5Q9NYP7 299 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 HAO2Q9NYQ3 351 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.7
TRAF3IP2-211ENST00000528599 CIB4A0PJX0 185 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HRGP04196 525 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MRPL3P09001 348 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR8G3PP0DMU2 310 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 NPR2P20594 1047 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PSMB1P20618 241 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 AGAP20933 346 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MSR1P21757 451 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 EEF1B2P24534 225 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CCKARP32238 428 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 NAA10P41227 235 aaPredicted RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RPS27P42677 84 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GUCA1AP43080 201 aaPredicted RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC15A1P46059 708 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TGFBR3Q03167 851 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TMED1Q13445 227 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ENDOGQ14249 297 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GGTLC2Q14390 218 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TBRG1Q3YBR2 411 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LCN1P1Q5VSP4 162 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SHFQ7M4L6 423 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 BHLHA15Q7RTS1 189 aaPredicted RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ERI1Q8IV48 349 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LRRC18Q8N456 261 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 BPIFB6Q8NFQ5 453 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR51G2Q8NGK0 314 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FGFBP3Q8TAT2 258 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 IPCEF1Q8WWN9 437 aaPredicted RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PSMG3-AS1Q96PY0 264 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF416Q9BWM5 594 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CCNB1IP1Q9NPC3 277 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 KCNJ16Q9NPI9 418 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SCN3BQ9NY72 215 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF224Q9NZL3 707 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RPL36Q9Y3U8 105 aaKnown RBP10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CSMD2Q7Z408 3487 aa10.64□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF503-AS2A6NEH8 195 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CCDC160A6NGH7 325 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SNTNA6NMZ2 147 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF593O00488 134 aaPredicted RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PATE4P0C8F1 98 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 DCKP27707 260 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HCCSP53701 268 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ADAM8P78325 824 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC35A2P78381 396 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RAB39AQ14964 217 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 NRN1LQ496H8 165 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 XAF1Q6GPH4 301 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C1orf162Q8NEQ5 155 aaPredicted RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR4F15Q8NGB8 312 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR13F1Q8NGS4 319 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LGALS12Q96DT0 336 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FBXO17Q96EF6 278 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 BOD1Q96IK1 185 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 INTS14Q96SY0 518 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MRPS18AQ9NVS2 196 aaKnown RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LHFPL6Q9Y693 200 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CENPEQ02224 2701 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FAM20BO75063 409 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CLDN14O95500 239 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CLDN1O95832 211 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HTR1AP08908 422 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CST2P09228 141 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SBK2P0C263 348 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF823P16415 610 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 IL32P24001 234 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GRNP28799 593 aaKnown RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 UGT2B10P36537 528 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms