RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ACKR4Q9NPB9 350 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 SLC2A8Q9NY64 477 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 NUP210LQ5VU65 1888 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 FITM1A5D6W6 292 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 CYR61O00622 381 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 AKR1C4P17516 323 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 ZNF141Q15928 474 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 ADGRE4PQ86SQ3 457 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 ZDHHC22Q8N966 263 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 RCBTB1Q8NDN9 531 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 SLC22A18Q96BI1 424 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 AMELYQ99218 206 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 CMKLR1Q99788 373 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 KXD1Q9BQD3 176 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 SYT4Q9H2B2 425 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 ELOVL3Q9HB03 270 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 SMCO4Q9NRQ5 59 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 SLC22A13Q9Y226 551 aa13.23□□□□□ -0.29
CAPN1-214ENST00000528165 IGKV1D-42A0A075B6H8 117 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 RENP00797 406 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 CD2P06729 351 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 FAM157CP0CG43 387 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 MUC1P15941 1255 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-214ENST00000528165 GPR18Q14330 331 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 ASPHD2Q6ICH7 369 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 DGAT2L6Q6ZPD8 337 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 PAQR4Q8N4S7 273 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-214ENST00000528165 MOGAT1Q96PD6 335 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 RNF122Q9H9V4 155 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 LPAR3Q9UBY5 353 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 CGGBP1Q9UFW8 167 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-214ENST00000528165 KCNG2Q9UJ96 466 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 A0A1W2PPC1 479 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 PRR19A6NJB7 356 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 DOK2O60496 412 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 STK17BO94768 372 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 GPANK1O95872 356 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 ABCD3P28288 659 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 RBM39Q14498 530 aaKnown RBP13.22□□□□□ -0.29
CAPN1-214ENST00000528165 ZNF74Q16587 644 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 EIF2S3LQ2VIR3 472 aaKnown RBP13.22□□□□□ -0.29
CAPN1-214ENST00000528165 MOGAT2Q3SYC2 334 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 AGBL4Q5VU57 503 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 DRAM2Q6UX65 266 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 LRRC75AQ8NAA5 344 aa13.22□□□□□ -0.29
CAPN1-214ENST00000528165 A0A0A6YYH2 397 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 C5orf52A6NGY3 159 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 A6NJ64 397 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 EIF1BO60739 113 aaKnown RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 ICOSLGO75144 302 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 ERCC1P07992 297 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 SFTA3P0C7M3 94 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 CEBPBP17676 345 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 SERPINF1P36955 418 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 EIF1P41567 113 aaKnown RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 ARRB1P49407 418 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 MEP1BQ16820 701 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 MST1LQ2TV78 715 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 MESTQ5EB52 335 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 FAHD2BQ6P2I3 314 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 CORO6Q6QEF8 472 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 FAM174AQ8TBP5 190 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 HOXB13Q92826 284 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 RERGQ96A58 199 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 C14orf79Q96F83 325 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 FAHD2AQ96GK7 314 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 LMF2Q9BU23 707 aaKnown RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 CYTL1Q9NRR1 136 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 TAS2R4Q9NYW5 299 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 PILRAQ9UKJ1 303 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 SLC17A4Q9Y2C5 497 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 NOTCH4Q99466 2003 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 UBE2CO00762 179 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 DUS4LO95620 317 aaKnown RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 CAV2P51636 162 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 AKIRIN2Q53H80 203 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 OR10K2Q6IF99 312 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 FDX2Q6P4F2 183 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 GRASPQ7Z6J2 395 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 OTOSQ8NHW6 89 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 CD99L2Q8TCZ2 262 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 NUDCD2Q8WVJ2 157 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 NKD1Q969G9 470 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 MICU1Q9BPX6 476 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 NOSIPQ9Y314 301 aaKnown RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 MRPS18BQ9Y676 258 aaKnown RBP13.21□□□□□ -0.29
CAPN1-214ENST00000528165 LAMA3Q16787 3333 aa13.21□□□□□ -0.29
CAPN1-214ENST00000528165 SERINC4A6NH21 518 aa13.21□□□□□ -0.3
CAPN1-214ENST00000528165 SSX5O60225 188 aa13.21□□□□□ -0.3
CAPN1-214ENST00000528165 IFI6P09912 130 aa13.21□□□□□ -0.3
CAPN1-214ENST00000528165 ADPRHP54922 357 aa13.21□□□□□ -0.3
CAPN1-214ENST00000528165 CYCSP99999 105 aaKnown RBP13.21□□□□□ -0.3
CAPN1-214ENST00000528165 SGCGQ13326 291 aa13.21□□□□□ -0.3
CAPN1-214ENST00000528165 SLC17A1Q14916 467 aa13.21□□□□□ -0.3
CAPN1-214ENST00000528165 NNATQ16517 81 aa13.21□□□□□ -0.3
CAPN1-214ENST00000528165 EMC4Q5J8M3 183 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms