RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MAGIXQ9H6Y5 334 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 DCAF13Q9NV06 445 aaKnown RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 TAAR3PQ9P1P4 343 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 EIF3KQ9UBQ5 218 aaKnown RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 EGFL7Q9UHF1 273 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 TMEFF2Q9UIK5 374 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 RTTNQ86VV8 2226 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 TCRBV5S2A0A599 114 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 DHRS12A0PJE2 317 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 LYNX1G3V0Z9 82 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 CXCR6O00574 342 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-212ENST00000527887 AHCYL1O43865 530 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 IGHV3-13P01766 116 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 FAM157BP0CG42 384 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 LYNX1P0DP58 116 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 SAGP10523 405 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-212ENST00000527887 ATP6V1B2P21281 511 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 COL8A2P25067 703 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 STOMP27105 288 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 PRKCDQ05655 676 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 PABPC1L2AQ5JQF8 200 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 CBLL1Q75N03 491 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 SYT9Q86SS6 491 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 OAFQ86UD1 273 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 PAQR4Q8N4S7 273 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-212ENST00000527887 ACOT11Q8WXI4 607 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-212ENST00000527887 NABP1Q96AH0 204 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 SOX7Q9BT81 388 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 NDEL1Q9GZM8 345 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 RACGAP1Q9H0H5 632 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 VCX3BQ9H321 246 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 ANKRD19PQ9H560 264 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 MYEF2Q9P2K5 600 aaKnown RBP12.15□□□□□ -0.46
CAPN1-212ENST00000527887 RPS6KA6Q9UK32 745 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 FZR1Q9UM11 496 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 SAMD4AQ9UPU9 718 aaKnown RBP12.15□□□□□ -0.46
CAPN1-212ENST00000527887 UGT2A1Q9Y4X1 527 aa12.15□□□□□ -0.46
CAPN1-212ENST00000527887 YLPM1P49750 1951 aaKnown RBP12.15□□□□□ -0.46
CAPN1-212ENST00000527887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.471e-8■■□□□ 13.8
CAPN1-212ENST00000527887 H3BSA7 217 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 SLC2A10O95528 541 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 CST2P09228 141 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 NAT2P11245 290 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 CCL2P13500 99 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 LIPAP38571 399 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 CTXN1P60606 82 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 MAD2L1BPQ15013 274 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-212ENST00000527887 TRIP10Q15642 601 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 SGCAQ16586 387 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 FAM98BQ52LJ0 330 aaKnown RBP12.14□□□□□ -0.47
CAPN1-212ENST00000527887 IFI44LQ53G44 452 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 LIPNQ5VXI9 398 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 MBOAT2Q6ZWT7 520 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 RRM2BQ7LG56 351 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 CYP4Z1Q86W10 505 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 ADGRG5Q8IZF4 528 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 PQLC1Q8N2U9 271 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 RFLNBQ8N5W9 214 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 CPEB3Q8NE35 698 aaKnown RBP12.14□□□□□ -0.47
CAPN1-212ENST00000527887 OR1J1Q8NGS3 322 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 PYDC1Q8WXC3 89 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 POM121L2Q96KW2 1035 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
CAPN1-212ENST00000527887 NKX1-2Q9UD57 310 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-212ENST00000527887 CGGBP1Q9UFW8 167 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-212ENST00000527887 TIMM10BQ9Y5J6 103 aa12.14□□□□□ -0.47
CAPN1-212ENST00000527887 EFCAB9A8MZ26 197 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 ICMTO60725 284 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 RP2O75695 350 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 CLPTM1O96005 669 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 RAP2AP10114 183 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 ZNF32P17041 273 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 MAKP20794 623 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 TUBG1P23258 451 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 GCH1P30793 250 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 IL2RGP31785 369 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 CDAP32320 146 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 CRYBB2P43320 205 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 GDI2P50395 445 aaKnown RBP12.13□□□□□ -0.47
CAPN1-212ENST00000527887 PSG4Q00888 419 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 ARL9Q6T311 187 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 CYP2R1Q6VVX0 501 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 ZNF730Q6ZMV8 503 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 FOXL2NBQ6ZUU3 175 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 TMPRSS11FQ6ZWK6 438 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 VTCN1Q7Z7D3 282 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 GLCCI1Q86VQ1 547 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 NRMQ8IXM6 262 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 LRRC75AQ8NAA5 344 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 CANT1Q8WVQ1 401 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 NSMAFQ92636 917 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 ELOVL3Q9HB03 270 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 C8orf4Q9NR00 106 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 TUBG2Q9NRH3 451 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 CYSLTR2Q9NS75 346 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 ZNF275Q9NSD4 429 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms