RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 RASSF5Q8WWW0 418 aa19.89■□□□□ 0.77
CPSF1-202ENST00000527827 DUX5Q96PT3 197 aa19.89■□□□□ 0.77
CPSF1-202ENST00000527827 DCLRE1CQ96SD1 692 aaKnown RBP19.89■□□□□ 0.77
CPSF1-202ENST00000527827 DIRC2Q96SL1 478 aa19.89■□□□□ 0.77
CPSF1-202ENST00000527827 TXNIPQ9H3M7 391 aa19.89■□□□□ 0.77
CPSF1-202ENST00000527827 RIMS3Q9UJD0 308 aa19.89■□□□□ 0.77
CPSF1-202ENST00000527827 NUP50Q9UKX7 468 aa19.89■□□□□ 0.77
CPSF1-202ENST00000527827 POLR3KQ9Y2Y1 108 aaPredicted RBP19.89■□□□□ 0.77
CPSF1-202ENST00000527827 DNAJC9-AS1A6NH13 148 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 VIMP08670 466 aaKnown RBP19.88■□□□□ 0.77
CPSF1-202ENST00000527827 CST2P09228 141 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 SBK2P0C263 348 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 LAP3P28838 519 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 TAS2R41P59536 307 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 TNFAIP6P98066 277 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-202ENST00000527827 PIN1Q13526 163 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-202ENST00000527827 BCL6BQ8N143 479 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-202ENST00000527827 CLDN22Q8N7P3 220 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 TMEM106BQ9NUM4 274 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 EGFL7Q9UHF1 273 aa19.88■□□□□ 0.77
CPSF1-202ENST00000527827 SHOX2O60902 331 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-202ENST00000527827 OR5F1O95221 314 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 IGHMP01871 453 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 SEC61A1P61619 476 aaKnown RBP19.87■□□□□ 0.77
CPSF1-202ENST00000527827 PSG7Q13046 419 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 ZNF154Q13106 437 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 CDK5R2Q13319 367 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 ZMAT1Q5H9K5 638 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 ARMCX4Q5H9R4 360 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 MTX3Q5HYI7 312 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 AGBL2Q5U5Z8 902 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 ZNF774Q6NX45 483 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 FOXL2NBQ6ZUU3 175 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 ALDH16A1Q8IZ83 802 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 C4orf45Q96LM5 186 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 ZNF48Q96MX3 618 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-202ENST00000527827 ALG12Q9BV10 488 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 POLR2J2Q9GZM3 115 aaKnown RBP19.87■□□□□ 0.77
CPSF1-202ENST00000527827 POLR2J3Q9H1A7 115 aaKnown RBP19.87■□□□□ 0.77
CPSF1-202ENST00000527827 PATZ1Q9HBE1 687 aaKnown RBP19.87■□□□□ 0.77
CPSF1-202ENST00000527827 PLEK2Q9NYT0 353 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 HIF3AQ9Y2N7 669 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 TIMM10BQ9Y5J6 103 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 AUP1Q9Y679 476 aa19.87■□□□□ 0.77
CPSF1-202ENST00000527827 GMNCA6NCL1 334 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 NR2C1P13056 603 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 ZNF12P17014 697 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 TOP3AQ13472 1001 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-202ENST00000527827 ALG10Q5BKT4 473 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 BEND6Q5SZJ8 279 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-202ENST00000527827 TSPEARQ8WU66 669 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 STON2Q8WXE9 905 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 ELOVL3Q9HB03 270 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 MED31Q9Y3C7 131 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 INSIG2Q9Y5U4 225 aa19.86■□□□□ 0.77
CPSF1-202ENST00000527827 TIMM8AO60220 97 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-202ENST00000527827 PIP5K1CO60331 668 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 SLC6A9P48067 706 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 ARHGDIAP52565 204 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 ENDOGQ14249 297 aaKnown RBP19.85■□□□□ 0.77
CPSF1-202ENST00000527827 TAF11Q15544 211 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 TMEM155Q4W5P6 130 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 Q6ZR03 302 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 SPICQ8N5J4 248 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 ZNF283Q8N7M2 679 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 THOC1Q96FV9 657 aaKnown RBP19.85■□□□□ 0.77
CPSF1-202ENST00000527827 RBP7Q96R05 134 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 GPA33Q99795 319 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 POFUT1Q9H488 388 aa19.85■□□□□ 0.77
CPSF1-202ENST00000527827 ZMAT3Q9HA38 289 aaKnown RBP19.85■□□□□ 0.77
CPSF1-202ENST00000527827 A8MXK9 166 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 F5H0A9 414 aaPredicted RBP19.84■□□□□ 0.77
CPSF1-202ENST00000527827 OR1E2P47887 323 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 RPL27P61353 136 aaKnown RBP19.84■□□□□ 0.77
CPSF1-202ENST00000527827 PCBD1P61457 104 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 ZMYND11Q15326 602 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 NANOGP8Q6NSW7 305 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 LRRC28Q86X40 367 aaPredicted RBP19.84■□□□□ 0.77
CPSF1-202ENST00000527827 CALHM3Q86XJ0 350 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 KLHL36Q8N4N3 616 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 SAMD8Q96LT4 415 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 SIGLEC11Q96RL6 698 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 UNKLQ9H9P5 680 aaKnown RBP19.84■□□□□ 0.77
CPSF1-202ENST00000527827 BAG5Q9UL15 447 aa19.84■□□□□ 0.77
CPSF1-202ENST00000527827 FBP2O00757 339 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 SCG5P05408 212 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 THRBP10828 461 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 BAMBIQ13145 260 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 RABL3Q5HYI8 236 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 ZER1Q7Z7L7 766 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 IGFN1Q86VF2 1251 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 LRRC75AQ8NAA5 344 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 FNDC8Q8TC99 324 aa19.83■□□□□ 0.77
CPSF1-202ENST00000527827 TGP01266 2768 aa19.83■□□□□ 0.76
CPSF1-202ENST00000527827 A0A1W2PPL8 197 aa19.82■□□□□ 0.76
CPSF1-202ENST00000527827 RNASE1P07998 156 aaKnown RBP19.82■□□□□ 0.76
CPSF1-202ENST00000527827 MSR1P21757 451 aa19.82■□□□□ 0.76
CPSF1-202ENST00000527827 CTXN1P60606 82 aa19.82■□□□□ 0.76
CPSF1-202ENST00000527827 BTG1P62324 171 aa19.82■□□□□ 0.76
CPSF1-202ENST00000527827 ARL9Q6T311 187 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms