RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 C11orf98E9PRG8 122 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 DNASE2O00115 360 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 CCSO14618 274 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 OR6A2O95222 327 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 WBP2NLQ6ICG8 309 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 BIVMQ86UB2 503 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 OOSP2Q86WS3 158 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 CLEC1AQ8NC01 280 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 CLRN3Q8NCR9 226 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 ATOH1Q92858 354 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 AMELYQ99218 206 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 LPAR4Q99677 370 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 GPN3Q9UHW5 284 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 PLEKHA6Q9Y2H5 1048 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 HIF3AQ9Y2N7 669 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 AHCTF1Q8WYP5 2266 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 APBB3O95704 486 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 CTSEP14091 401 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 MST1P26927 711 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 CD34P28906 385 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 GNALP38405 381 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 BTG2P78543 158 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 NFATC4Q14934 902 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 MEP1BQ16820 701 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 CLVS2Q5SYC1 327 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 SYT13Q7L8C5 426 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 FAM122BQ7Z309 247 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 PM20D2Q8IYS1 436 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 C16orf52Q8NHV5 167 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 C4orf45Q96LM5 186 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF75AQ96N20 296 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 VRK1Q99986 396 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 SLC19A3Q9BZV2 496 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 HEATR5AQ86XA9 2040 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 DCDC2BA2VCK2 349 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 NPIPB9F8W1W9 429 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 CYB5AP00167 134 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 PNMTP11086 282 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF28P17035 718 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 KIR3DL2P43630 455 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 AKR1D1P51857 326 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 SCAND1P57086 179 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 FGL1Q08830 312 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 NKPD1Q17RQ9 610 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 PDSS1Q5T2R2 415 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 GLT8D1Q68CQ7 371 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 NDUFAF7Q7L592 441 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 GALNT16Q8N428 558 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 OR1J2Q8NGS2 313 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 NKD1Q969G9 470 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 HPF1Q9NWY4 346 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 RASL12Q9NYN1 266 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 MAP1BP46821 2468 aaKnown RBP11.28□□□□□ -0.6
CAPN1-208ENST00000527323 DCHS1Q96JQ0 3298 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 A0A0J9YY10 115 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 SLC17A2O00624 439 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 ITGB2P05107 769 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 CT45A8P0DMV1 189 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 CT45A9P0DMV2 189 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 EGR3Q06889 387 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 CT45A2Q5DJT8 189 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 MESTQ5EB52 335 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 CD163Q86VB7 1156 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 MCATQ8IVS2 390 aaKnown RBP11.28□□□□□ -0.6
CAPN1-208ENST00000527323 BPIFB2Q8N4F0 458 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 EXD3Q8N9H8 876 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 OR10Z1Q8NGY1 313 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 GPX8Q8TED1 209 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 MCHR2Q969V1 340 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 KTI12Q96EK9 354 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-208ENST00000527323 TSPAN32Q96QS1 320 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 MNTQ99583 582 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-208ENST00000527323 ALX4Q9H161 411 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-208ENST00000527323 MMP25Q9NPA2 562 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 PRTFDC1Q9NRG1 225 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 CKLFQ9UBR5 152 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 DHDHQ9UQ10 334 aa11.28□□□□□ -0.6
CAPN1-208ENST00000527323 OR14I1A6ND48 311 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 XKRYO14609 159 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 OIP5O43482 229 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 DOK2O60496 412 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 AKT2P31751 481 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 LY6G6FQ5SQ64 297 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 MANEAQ5SRI9 462 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 GLYATL3Q5SZD4 288 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 SEH1LQ96EE3 360 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 CMKLR1Q99788 373 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 SLC25A21Q9BQT8 299 aaPredicted RBP11.27□□□□□ -0.6
CAPN1-208ENST00000527323 WDR13Q9H1Z4 485 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 OR10A5Q9H207 317 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 FAM60AQ9NP50 221 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 SLC39A1Q9NY26 324 aa11.27□□□□□ -0.6
CAPN1-208ENST00000527323 CGGBP1Q9UFW8 167 aaPredicted RBP11.27□□□□□ -0.6
CAPN1-208ENST00000527323 MRPS33Q9Y291 106 aaKnown RBP11.27□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF736B4DX44 427 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms