RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 OR7D2Q96RA2 312 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 NUDT16L1Q9BRJ7 211 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 WACQ9BTA9 647 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 PTDSS2Q9BVG9 487 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 TRIM15Q9C019 465 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 PPA2Q9H2U2 334 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 DPAGT1Q9H3H5 408 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CENPHQ9H3R5 247 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 REEP4Q9H6H4 257 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RNF121Q9H920 327 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 PALMDQ9NP74 551 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 TMEM106BQ9NUM4 274 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 ACOXLQ9NUZ1 547 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 SLC7A8Q9UHI5 535 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RPUSD1Q9UJJ7 312 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 POFUT2Q9Y2G5 429 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 FAM96BQ9Y3D0 163 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 USH1CQ9Y6N9 552 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CCDC189A1A4V9 331 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 A8MXK9 166 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 E7ESA3 106 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 PGRMC1O00264 195 aaKnown RBP4.39□□□□□ -1.71
SF3B2-205ENST00000526653 TM9SF1O15321 606 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 MGRN1O60291 552 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 STX11O75558 287 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 VAMP5O95183 116 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 IGHV3-13P01766 116 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 RPS17P08708 135 aaKnown RBP4.39□□□□□ -1.71
SF3B2-205ENST00000526653 OR12D1P0DN82 309 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 CD28P10747 220 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 B4GALT1P15291 398 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF43P17038 809 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 CCNOP22674 350 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 STX2P32856 288 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 MMP15P51511 669 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 BTG1P62324 171 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 KCNJ10P78508 379 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 CHI3L2Q15782 390 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 UAP1Q16222 522 aaPredicted RBP4.39□□□□□ -1.71
SF3B2-205ENST00000526653 TMEM155Q4W5P6 130 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 UNC50Q53HI1 259 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 ZFAND6Q6FIF0 208 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 SLC27A4Q6P1M0 643 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 CYS1Q717R9 158 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 RNF130Q86XS8 419 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF584Q8IVC4 421 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 CLEC4FQ8N1N0 589 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 SCCPDHQ8NBX0 429 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 SLC30A7Q8NEW0 376 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 OR4F17Q8NGA8 305 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 OR1J1Q8NGS3 322 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 PPP1R35Q8TAP8 253 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 DCAKDQ8WVC6 231 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 LHX4Q969G2 390 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 TSSK3Q96PN8 268 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 OR4F4Q96R69 305 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 EMC6Q9BV81 110 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 CDH20Q9HBT6 801 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 EXD2Q9NVH0 621 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 PNPOQ9NVS9 261 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF224Q9NZL3 707 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 TMCO1Q9UM00 188 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 RASD1Q9Y272 281 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 SNX24Q9Y343 169 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 HERC2O95714 4834 aa4.39□□□□□ -1.71
SF3B2-205ENST00000526653 IGHV1-69DA0A0B4J2H0 117 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 ZSCAN5BA6NJL1 495 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 A8MT66 165 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 CEACAM18A8MTB9 384 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 E9PQ18 207 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 F5H0A9 414 aaPredicted RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 POC1B-GALNT4F8VUJ3 575 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 CFLARO15519 480 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 IGHV1-69P01742 117 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 RPS2P15880 293 aaKnown RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 MATN1P21941 496 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 GTF2E2P29084 291 aaKnown RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 MPV17P39210 176 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 FRKP42685 505 aaPredicted RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF75DP51815 510 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 FOXA1P55317 472 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 MRPS25P82663 173 aaKnown RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 TNFAIP6P98066 277 aaPredicted RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 MFSD13AQ14CX5 517 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 KIAA0040Q15053 153 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF260Q3ZCT1 412 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF774Q6NX45 483 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 Q6ZWC4 215 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 KLBQ86Z14 1044 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 GALNT4Q8N4A0 578 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 VPS37AQ8NEZ2 397 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 OR7A2PQ8NGA2 310 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 OR5AK3PQ8NH89 298 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 FAM76AQ8TAV0 307 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 XAGE5Q8WWM1 108 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 THOC1Q96FV9 657 aaKnown RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 TXNDC15Q96J42 360 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms